Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0471 CACCTGCCCCAAAGAACAGACAATGAGATCAAGAACTACTGGAAAACCAACATCAAGAAAAGACTCATCAGAATGAGCTTAGATCCCATTACCATTACCCACAAAACAATAAAACAGAACACATTTGAAGGCTGTGGTGATGGCCAAGACCAGTCCAAGGACACCATCAATATCACGCACGTGGCTCAGTGGGAGAGGGCCCGATTTGAAACTGAAGCCAGAGGATCTATGTTGCAAGTTGGATCTGGATCCTCAAATCTCTCTGGGCTAATCTTAAGCAAGATTCCAACTCAACCTTGTCTTTCATCACATTCAGTGTCCACCGAACACAAGAGAGTGCATAACATGTATGCCCTCGTGCTTACCACAAATCATGATTTTAGGTCATCTGTATCCACTTTGAGCATTCCCAAGCTTCCTGCAGTTTCTAATATTCCACAAATCACCAACACAGAAAGTTTACTTACATATAAGGCTGACAATAATGTCATGGAAGGCTGTGTTTCAAACTTACAAGATGATGACATTATGCTGGCTGTGGAAGCATTTAGAACAGCAAGGTCTGAGAGTATTGAAGAGCTGTTCAATGAATTTACTCCCGCGTAA 606 0.4241 HLPQRTDNEIKNYWKTNIKKRLIRMSLDPITITHKTIKQNTFEGCGDGQDQSKDTINITHVAQWERARFETEARGSMLQVGSGSSNLSGLILSKIPTQPCLSSHSVSTEHKRVHNMYALVLTTNHDFRSSVSTLSIPKLPAVSNIPQITNTESLLTYKADNNVMEGCVSNLQDDDIMLAVEAFRTARSESIEELFNEFTPA* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0471 201 Gene3D - 1 43 - -
Pvu3g0471 201 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 22 IPR017930 -
Pvu3g0471 201 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 81 - -
Pvu3g0471 201 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 2 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0471 Pvu-Chr3 5285026 5285858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0471 1 74 MYB Transcription Factor Family AT3G01140 54.054 1.50e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0471 K09422 - pvu:PHAVU_003G0459001 344.739