Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0468 ATGGAGGGCAGAACAAGCTCTGTGCTCCCACCTGGCTTCAGGTTTCACCCCACTGATGAGGAACTAATCGTCTACTACCTTTGTAACCAAGCCACATCAAAACCATGCCCTGCATCAATCATTCCAGAAGTGGATATCTACAAGTTTGATCCATGGGAATTACCTGAGAAAACAGACTTTGGAGAAAATGAATGGTACTTCTTTAGCCCAAGAGAGAGGAAGTACCCAAATGGGGTGAGGCCTAATAGAGCAACTGTGTCTGGGTATTGGAAGGCCACTGGTACTGACAAAGCAATCTATAGTGGCTCTAAGCATATTGGGGTGAAGAAAGCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAGACAGATTGGATCATGCATGAGTACAGATTAATAGGATCAAGAAGACAAACCAATAGACAAATGGGATCCATGAGGCTAGATGACTGGGTCTTGTGTAGGATCTACAAGAAGAAGAACGTGGGAAAATCATTGGAGGCAAAAGAGGACTACCCAATAGCACAAATCAATCTTACACCACCAAACAATGGCACTGAACAAGAAGTGGTGAAATTTCCAAGGACAAGTTCCCTTACTCATCTTTTGGATATGGATTACTTGGGTCCAATATCACACATACTATCTGATGCATCATACACTTCAACCTTTGATTTTCAACTTAACACTGTCAATGGTGGATAG 711 0.4262 MEGRTSSVLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPEKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQTNRQMGSMRLDDWVLCRIYKKKNVGKSLEAKEDYPIAQINLTPPNNGTEQEVVKFPRTSSLTHLLDMDYLGPISHILSDASYTSTFDFQLNTVNGG* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0468 236 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Pvu3g0468 236 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Pvu3g0468 236 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 234 - -
Pvu3g0468 236 PANTHER NAC TRANSCRIPTION FACTOR 56 1 234 - -
Pvu3g0468 236 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Pvu3g0468 236 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0468 Pvu-Chr3 5176589 5178053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0468 1 216 NAC Transcription Factor Family AT1G69490 68.421 3.94e-116 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu3g0468 NAM 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0468 - - pvu:PHAVU_003G045600g 498.434