Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0459 ATGGGTAAAAACACTTCCGAATCTGATTCCCATCACAAACGTCTTGGTCTTTTAAAAGATCAAGTTCACTTGGTTAAAAGGAAAGACTCTGATCGCCATGAGATTGCTCCAATCCAAGACCAACTATCATTTGAGAAGGGTTTCTTCATTGTAATTCGTGCATGTCAATTGTTAGCCCAAAAGAATGATGGAATAGTATTAGTAGGGGTGGCGGGTCCTTCCGGAGCAGGCAAGACTGTATTTACTGAAAAGATACTCAACTTCATGCCCAGCATTGCTGTCATTTCAATGGATAATTACAATGATTCTAGTCGGATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGACTACGACACATTACTCCAGAATTTAGGTGATTTAAAGGAAGGAAAGCCTGTTCAAGTTCCCATATATGATTTCAAATCCAGTACACGAACAGGATACAGGACAGTAGAAGCCCCAACTTCTCGTATTGTGTTTATAGAGGGCATCTATGCATTGAGTGAAAAGTTGCGACCTCTACTGGACCTTCGAGTCTCTGTTACAGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGATATTCAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTGTATCCAATGTACAAGGCCTTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTCAATCCATTTACTGGATTCCAGAGCCCAACTTACATATTAAAGTCAGCAAAGAATCTAGCAGTGGATCAAATCAAAGCTGTTCTCTCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCCGGTGAAGATCCAGAAACTTGCCAGTCATATTTGCGGATGCGAAATAAGGACGGGAAATACAGTCTCATGTTCGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGTGGACTAATGGCCTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGCCATGTTTTTTCTGATGATAGGGTTTGTGTGAAACTCGATTGGCTTGAGCAACTCAATAGACATTATGTTCAGGTACAAGGAAGAGATCGCTTGGTTTTAAAATACATAGGACAGCAGCTAGGACTAGATGGTTCCTACATTCCTCGTACGTACATTGAGCAAATTCAAATTGAAAAGCTTGTGGATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAACTCAGCCTGGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGGATATCACAGTCATATACCAATCAAAGGGACAAAAACCTTGCCAAGGTTGGATTTGATGGCAACAATAGAAGGTTTGGTGAAAGAAATTCAGAGTCCAGTACAATGTCAGTTAATCAGGGAGCCATCAATCAGCTTTCAGACCAAATTTCTGCCCTCAATGATAGAATGGATGAGTTTACAAATCGCATTGAAGAGCTGAATTCCAAGTTAAACATCAAGAGAAATTCTCCAACCCAACAAAATATGTCACTTCAAGCTGAGACATGCAATGGATCAGCTCCCACCTCATACTTCATCACTGGTTTGGGCAATGGTTCCCTAACTGGATCTAAAATGGCAAATTCCTCTTCGTCATCACAATTAACTAAGGATTTTCCTTTAATGGATGAGATATCAAGCATTGCACGCAGTCAGCGTCAGATCATGCATCAATTGGACAATCTGAATAATCTTCTCAGAGGGAACTCAGGGGAGAAGTCTCAGCAAACAAGAACTAACCGGAGAAGCATAGATACAGCATCAGATTCCATGGGAACTTCTGTTATGGCAGTGGTGGCAGTTGGTTGCTTGGGTATCTTCTTGATGAAGGGTTTGTTGAACCGAAATTGA 1989 0.4093 MGKNTSESDSHHKRLGLLKDQVHLVKRKDSDRHEIAPIQDQLSFEKGFFIVIRACQLLAQKNDGIVLVGVAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNLGDLKEGKPVQVPIYDFKSSTRTGYRTVEAPTSRIVFIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAKNLAVDQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLNRHYVQVQGRDRLVLKYIGQQLGLDGSYIPRTYIEQIQIEKLVDEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGISQSYTNQRDKNLAKVGFDGNNRRFGERNSESSTMSVNQGAINQLSDQISALNDRMDEFTNRIEELNSKLNIKRNSPTQQNMSLQAETCNGSAPTSYFITGLGNGSLTGSKMANSSSSSQLTKDFPLMDEISSIARSQRQIMHQLDNLNNLLRGNSGEKSQQTRTNRRSIDTASDSMGTSVMAVVAVGCLGIFLMKGLLNRN* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0459 662 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 654 - -
Pvu3g0459 662 Coils Coil 502 536 - -
Pvu3g0459 662 Pfam CYTH domain 253 404 IPR023577 -
Pvu3g0459 662 SUPERFAMILY CYTH-like phosphatases 265 407 IPR033469 -
Pvu3g0459 662 PANTHER URIDINE KINASE 5 654 - -
Pvu3g0459 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 236 IPR027417 -
Pvu3g0459 662 MobiDBLite consensus disorder prediction 610 634 - -
Pvu3g0459 662 CDD UMPK_like 67 239 - -
Pvu3g0459 662 PRINTS Uridine kinase signature 65 82 - -
Pvu3g0459 662 PRINTS Uridine kinase signature 132 147 - -
Pvu3g0459 662 PRINTS Uridine kinase signature 188 198 - -
Pvu3g0459 662 PRINTS Uridine kinase signature 224 237 - -
Pvu3g0459 662 Gene3D - 254 412 - -
Pvu3g0459 662 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Pvu3g0459 662 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Pvu3g0459 662 Gene3D - 66 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0459 Pvu-Chr3 5071159 5083928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0459 67 236 PRT Gene Family AT5G40870 28.177 1.08e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0459 K00876 - gmx:100797542 1183.32