Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0451 ATGGCCTCCGGCGACGGCCATGATTCACTGCGCAAGAACCGCCGCTGCTCTCTTTCGAAAGATGCCGACCGATCGTCGAAGCGCCACCGCCACCGCCGTCGCCATGGAAGCAGAAAACATGGGGAAGAAAGTGAAAGCTATTGTGAAACCGCCGACTGTGAAACTGCTCCGGTGGCTCCTTCTCCGATTCCGCCCCGTAGTTCTGGCACGAATCGTGGCGTTCCCGATGATGACGTCGAGGAGGGAGAAATTCTCGAAGAAGACGAAGCGAAATTAGACGCGCAATTTGATGCTAACCCTGCCGGAACTGGCGTGACCGGAGATCGAAATGTTCGATCCAATAACACAAATCTGGGACATTTGGTCAGGGAGACTTTGTTGCATGCTGAAGATTTAAAAACTAGAACACAGTGCACTGTTGATGATAAATCTATTGGTCCTGATGGCGAAGAAGAGGCATGCCGAAGGAGTCACTTTGGCAGTGGAATACATGAAGATGATATGAACAATGAGCTTTTGGATGGGAAGGATGATAGAACTAGTATAGATTATATGGGCAATGGGCTTTTGGATCATAAATCTTCAGGTGGGGAATATAAATGTTTTAAGGGAAATGAGAAACATAAAGGTTACTGTGAGGACGAGGACTTAGAGCTTGACAGGAGGAAAGTTGGTTACTATAGAATCTCTTCCTCAGAAAGTGGAGAGAAATATCGAAGATCAAGACGGCGTTCTCGTGATAGATATAGAAGTCAATCAAGATCAAATGGATGTGCTAGGGACAGGTCTCGTTCTGGTAGTATAGCAGAAAAACATGCTCATTCAAAGAAAAGGCACTCTGATGAAAAGGGGGAGCTGTCGTATGCTGGTAGACTGAAGACTGACTACGACCTTGATGATGAAAGAATGATGGCAAGCAGATGGGAGAATAGAGATTTGGTGGAAGAAAGAAGGGAACACAGAGCAAGTTATCATGTTCGAGAGGCACGGGATAGGGATAGGGATAGGAGTAGAGACAAAGATGTTAAGAGAGACTTAAAGATGGAAAAAGAACAAGAGAGGAGTAGGAATATGGAGGTTGATTGGGTACTTAGAAGGGAAAAAGGACTTGAAAGGAGCCATGAGAGACACAGAATGAATGGGGAAGAAGATAGGAGGCAAAGAGAGGATGATCGGGATAGGAGAAGAGAAAAAGTTATAGATAGGAGCTGTGAGACAGTGTTTGATAGGGATAGGAGAAGGGAAAAGGAAAGATATCGAAGTAGAGAGAGAACAAGGGGTGGTGAGAGAGACAGGGACCGGGAGACTGCTGATCATGATGATAGGAGTTGGGAAAGAGATAAAGTTAAGGAGAGGGAGAAGCGAGATGATAGAAGGAGGCACACGGGTAGAGACACTTTGAATGGTATGGGTAAGTATCTGCCTCGTGAGGATGATTATGATAGTTGTGATAGGCATAGAATGCGTTCAAAACAAGAGGAAACCGAACACCACCAACAAAGAAAAAAGAATTCCTTGCCTGTAAAGGTTTATGATGAAAACAAATTACAGAGAGGGGAGGATGAACAAGATGAGTTAGATGAGAAGATTACATTGCAATCACCTGATCAAGAAGAGGAAGATTTCAATAGGGTTAAAGAAGAGAGTAGAAGGAGAAGGGAGGCAATCTTAGAGAAATACAAGAAGCAGCTGCAACAAGTAGAACAAAATACAGAAAACAAAGTAATAGACAAACAAGCTGTAGAGATTCCTCCTACCATTCCTAACATTCTCGAGGATGTGGAAGTGGAAACATTATTCTTTGTCAGGATATCTCCTCTGGAAAATGGAGATGTTGCTTCTGATATGATCTCCAGTGCTGGGGGCCTTGGAGAGGGTACACCTAAGAGTGAAGGAGCTGATGACAAATTTTGTGATGATATATTTGGTGAGACACCAACTGGAGTTCAGAAATCAGGTAAAGGAGAAGGTTTAAGAATTGAGAGGGGTGGCATACATGACAATTGGGATGATGCAGAGGGTTATTACAGTTATCGTTTTGGTGAAGTACTTGATGGCAGGTATGAAGTCATTGCTGCTCATGGGAGAGGTGTCTTTTCAACAGTGGTCCGGGCAAAGAATCTTGAAAGTAGTAATGGTGAACCTGGAGAAGTCGCCATAAAAATAATTCGTAGTAATGACACAATGTACAAGGCTGGTATGGATGAATCGGTGATATTAAAGAAATTAGTAGGTGCTGATCCAGATGATAAGCGTCATTGTGTTCGATTCCTTTCTAGTTTCAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTCCATATGAATCTGCGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTCAGGCTAACTGCAGTTAGAGCGTATGCTAAACAACTTTTTATTGCACTTAAGCATCTCCGGAACTGCGGTGTTCTCCATTGTGATATAAAACCAGATAATATGTTGGTGAATGAAGCTAAAAATGTTTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAAAATGAAGTTACTCCGTATCTAGTGAGTCGCTTTTATCGTGCCCCTGAAATCATACTTGGCTTAACCTATGATCATCCATTGGATATGTGGTCTGTAGGCTGTTGTTTGTATGAGCTCTATACAGGGAAGGTTCTTTTTCCAGGTTCTACTAACAATGACATGCTACGGCTTCATATGGAATTGAAGGGCCTTTTTCCTAAAAAGATGCTTCGGAAGGGAGCATTTATTGAACAGCATTTTGATCAGGACCTGAATTTTCTTGCTACAGAGGAGGACCCTGTGACGAAAAAGGCAATAAAGCGGATGATTCTCAACATAAAACCAAAAGATATTGGAACAATTATCACTGGCTCTCTAGGGGAGGATGCAAAGATGTTAGCCAATTTTAAGGATCTTCTTGAAAAGATTTTTGTATTGGATCCAGACAAGAGATTGACAGTCTCACAGGCATTGAATCACCCATTCATCACTGGCAAGTGA 3021 0.4267 MASGDGHDSLRKNRRCSLSKDADRSSKRHRHRRRHGSRKHGEESESYCETADCETAPVAPSPIPPRSSGTNRGVPDDDVEEGEILEEDEAKLDAQFDANPAGTGVTGDRNVRSNNTNLGHLVRETLLHAEDLKTRTQCTVDDKSIGPDGEEEACRRSHFGSGIHEDDMNNELLDGKDDRTSIDYMGNGLLDHKSSGGEYKCFKGNEKHKGYCEDEDLELDRRKVGYYRISSSESGEKYRRSRRRSRDRYRSQSRSNGCARDRSRSGSIAEKHAHSKKRHSDEKGELSYAGRLKTDYDLDDERMMASRWENRDLVEERREHRASYHVREARDRDRDRSRDKDVKRDLKMEKEQERSRNMEVDWVLRREKGLERSHERHRMNGEEDRRQREDDRDRRREKVIDRSCETVFDRDRRREKERYRSRERTRGGERDRDRETADHDDRSWERDKVKEREKRDDRRRHTGRDTLNGMGKYLPREDDYDSCDRHRMRSKQEETEHHQQRKKNSLPVKVYDENKLQRGEDEQDELDEKITLQSPDQEEEDFNRVKEESRRRREAILEKYKKQLQQVEQNTENKVIDKQAVEIPPTIPNILEDVEVETLFFVRISPLENGDVASDMISSAGGLGEGTPKSEGADDKFCDDIFGETPTGVQKSGKGEGLRIERGGIHDNWDDAEGYYSYRFGEVLDGRYEVIAAHGRGVFSTVVRAKNLESSNGEPGEVAIKIIRSNDTMYKAGMDESVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLTYDHPLDMWSVGCCLYELYTGKVLFPGSTNNDMLRLHMELKGLFPKKMLRKGAFIEQHFDQDLNFLATEEDPVTKKAIKRMILNIKPKDIGTIITGSLGEDAKMLANFKDLLEKIFVLDPDKRLTVSQALNHPFITGK* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0451 1006 Pfam Protein kinase domain 689 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0451 1006 Gene3D Phosphorylase Kinase; domain 1 659 747 - -
Pvu3g0451 1006 ProSiteProfiles Protein kinase domain profile. 688 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0451 1006 Coils Coil 546 577 - -
Pvu3g0451 1006 Gene3D Transferase(Phosphotransferase) domain 1 748 1004 - -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 230 296 - -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 415 547 - -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 264 296 - -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 140 176 - -
Pvu3g0451 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 309 396 - -
Pvu3g0451 1006 PANTHER DUAL SPECIFICITY PROTEIN KINASE 375 1006 - -
Pvu3g0451 1006 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 375 1006 - -
Pvu3g0451 1006 SMART serkin_6 688 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0451 1006 CDD STKc_PRP4 687 1003 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pvu3g0451 1006 SUPERFAMILY Protein kinase-like (PK-like) 675 1005 IPR011009 -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 1 24 - -
Pvu3g0451 1006 MobiDBLite consensus disorder prediction 1 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0451 Pvu-Chr3 4929309 4937795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0451 641 1005 MAP Kinase Gene Family AT2G18170 30.079 1.37e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pvu3g0451 Pkinase 8.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0451 K08827 - gmx:100776908 1063.14