Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0441 ATGTTTTTTTCTGTGTCCATTGGCTCTTCTGCGGCATTGCGTTTTCCACTCAGATGCAACGCCAAAATCTCTTCTCCCCGGGTTGTTGCTGCTGATGCCTTCCCTTCCTTTCTCCCCAAAGAGTTGCACACCATAGAAGACCCTTTTGCCAGAAAACTCGCCATGCGGATTCAGAGGCTACCTGTGCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCAGTGGTGCAGAGCAAGGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTACTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCTTGTGATGTGGAATCCAAGCGTGATCACTTCTACCAGTTTTGGAAATGCTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGATTTTGCGGTCAATTATCCCGAAGCTGTGGAGAAGCTTGTTCTGATTGGGGCTAGTGTATATGCAGAAGGAACTGGAAAGCTGGCAACCTTGCCCAGAGCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCTTTCCATTACGCTTATATGCCACCTATTTGACCTTTACAAACATTTCCTTCGGCACTAGCCTTGATTGGACTAATGTGGGGCGATTGCATTGTTCATTGCCTTGGTGGAATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTGCTCCTTTGATAGGAAAGGTAAAACAGAAAACACTGATAATATGGGGTGAGAATGATCGCATCATCAGCAATAAGTTTGCAGTGCAACTCCACTGTGAATTACCTGATGCATCTATACGCCAAATACCCCATTGTGGCCATCTTCCTCATCTGGAAAGACCAGATTCTACCATCAAATTAATTGTTGAATTTGTGCAGCAGAGAGAGGCTAAGAAATTGAATCCATATGTTGCACCAGTATGA 1032 0.4419 MFFSVSIGSSAALRFPLRCNAKISSPRVVAADAFPSFLPKELHTIEDPFARKLAMRIQRLPVPVRFSENPIMSSCVKPVVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVESKRDHFYQFWKCYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAVAYAGVNLLKSFPLRLYATYLTFTNISFGTSLDWTNVGRLHCSLPWWNDATVDFMTSGGYNVAPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDASIRQIPHCGHLPHLERPDSTIKLIVEFVQQREAKKLNPYVAPV* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0441 343 Pfam Alpha/beta hydrolase family 87 320 IPR000073 -
Pvu3g0441 343 PANTHER ALPHA/BETA FOLD HYDROLASE 8 341 - -
Pvu3g0441 343 Gene3D alpha/beta hydrolase 75 336 IPR029058 -
Pvu3g0441 343 SUPERFAMILY alpha/beta-Hydrolases 85 330 IPR029058 -
Pvu3g0441 343 PANTHER HYDROLASE 8 341 - -
Pvu3g0441 343 PRINTS Epoxide hydrolase signature 91 109 IPR000639 GO:0003824
Pvu3g0441 343 PRINTS Epoxide hydrolase signature 111 126 IPR000639 GO:0003824
Pvu3g0441 343 PRINTS Epoxide hydrolase signature 170 183 IPR000639 GO:0003824
Pvu3g0441 343 PRINTS Epoxide hydrolase signature 305 327 IPR000639 GO:0003824
Pvu3g0441 343 PRINTS Alpha/beta hydrolase fold signature 111 126 IPR000073 -
Pvu3g0441 343 PRINTS Alpha/beta hydrolase fold signature 156 169 IPR000073 -
Pvu3g0441 343 PRINTS Alpha/beta hydrolase fold signature 170 183 IPR000073 -
Pvu3g0441 343 PRINTS Alpha/beta hydrolase fold signature 274 288 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0441 Pvu-Chr3 4780585 4786972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0441 86 328 Acyl Lipid Metabolism Gene Families AT3G10840 23.885 9.89e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0441 - - gmx:100792060 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0441 3 4780585 4786972 Pvu3g0441 3 4780585 4786972 ECH
Pvu2g1054 2 20427858 20431508 Pvu3g0441 3 4780585 4786972 PCT