Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0429 ATGGAAAGCTGTACCAGCAACAGAAGTGACAACAACAATCACTGGAGAGCCGAGGAAGCCATTGGTGGCAACACTGAAGCTCTTCAGGCCCTTAGAGAACTCATCATATTCCCTATGCACTTCTCTCAAGAGGCACAGAAGCTTGGCCTTAAGTGGTCCAGAGGATTGCTGCTGTACGGTCCACCAGGCACTGGAAAGACAAGTTTGGTACGAGCAGTTGTTCGAGAGTGTGGGGCACATCTGACAATTATCAGTCCACACTCTGTTCGTAGAGCACATGCTGGTGAAAGTGAGAGAATTCTCCGTGATGCTTTTTCAGAGGCATCATCTCATGTAGCCTTGGGCAAGCCATCGGTTATCTTTATAGATGAAATCGATGCACTGTGTGCTCGCCGAGATTCCAAAAGGGAGCAAGATGTTCGACTTGCCTCTCAACTATTTACTCTGATGGACTCAAATAAGCCAGCCTTTTCTGCACCAGATGTAGTTGTAGTTGCATCAACTAACAGAGTGGATGCAATTGACCCTGCACTAAGAAGGTCTGGACGTTTTGATGCTGAAATCGAAGTTACTGTCCCAAATGAAGAGGACCGCTATCAAATTCTGAAGTTGTATACAAAGACAATTCCCTTGGATCCCAGTGTTGACTTAAAGTCTATTGCTGCGTCGTGCAATGGTTATGTTGGAGCTGATTTGGAGGCTTTGTGTCGTGAAGCCACCATGTTTGCAATAAAAAAATCCTCAAATGCAAAAGATGCTAGTAATTTCAGTCTAACAATGGAAGATTGGAAGAACGCAAGGTCTGTTGTTGGTCCAAGTATAACTAGAGGTGTTACTCTGGAAATTCCTAAAGTGACTTGGGAAGACATTGGTGGATTAAAAGATATAAAGAAAAAACTCCAGCAAGCTGTTGAATGGCCTATTAAGCATTCTGCTGCATTTTCAAGATTAGGAATATCCCCTGTACGTGGAATTCTTCTCCATGGGCCTCCAGGATGTTCCAAAACTACCCTTGCCAAAGCGGCTGCACATGCTGCCCAAGCATCTTTCTTTTCCTTAAGTGGTGCAGAATTGTATTCGATGTATGTTGGAGAGGGGGAAGCTTTACTTCGCAAAACATTTCAGAGAGCACGCCTTGCAGCACCCAGTATAATATTCTTTGACGAGGCTGATGTGGTAGCTGCCAAACGGGGTGACAGTTCAAGCAATGGTGCTACAGTTGGAGAGAGACTTTTATCCACTCTGCTAACTGAGATTGATGGCTTAGAAGAAGCAAAAGGAATTCTTGTTTTAGCAGCTACAAATCGCCCCTATGCAATTGATGCTGCACTTATGCGTCCTGGGCGTTTTGATCAGGTTCTGTATGTACCACCACCCGATTTAGAGGGTCGATATGAGATACTTTGTGTTCATACGCGGAAGATGAAAACAGGGCATGATGTTGACCTCAGAAGGCTAGCAGAAGACACAGAGCTGTTTACAGGTGCTGAATTGGAGGGATTATGCAAGGAAGCTGGAATTGTAGCTCTAAGGCAAGACATATCTGCTGCAGTTGTTTTTGACCGCCATTTCCAGATTGCCAAGAGTTCTTTAAAACCAGCGTTAACAAAAGAAGAAATCGACTCGTACTCATCTTTCATGAAGACCTCATCTCGAGCTTTGCCTAGCCACTCTGAAGCAGGTTTGAAAGCAGACAAGGGCAGAAGGAACAGGTCAGATTCTTTGTCTTTTGTCAAAATTGGGGTTGTCAGCTCTTTGTTATTGGCTGCTGCTGCTAAATACTATATCATGTATGGAGACCAAAGTGTACATCACATAGCTACCTGA 1827 0.4439 MESCTSNRSDNNNHWRAEEAIGGNTEALQALRELIIFPMHFSQEAQKLGLKWSRGLLLYGPPGTGKTSLVRAVVRECGAHLTIISPHSVRRAHAGESERILRDAFSEASSHVALGKPSVIFIDEIDALCARRDSKREQDVRLASQLFTLMDSNKPAFSAPDVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPNEEDRYQILKLYTKTIPLDPSVDLKSIAASCNGYVGADLEALCREATMFAIKKSSNAKDASNFSLTMEDWKNARSVVGPSITRGVTLEIPKVTWEDIGGLKDIKKKLQQAVEWPIKHSAAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRKTFQRARLAAPSIIFFDEADVVAAKRGDSSSNGATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDQVLYVPPPDLEGRYEILCVHTRKMKTGHDVDLRRLAEDTELFTGAELEGLCKEAGIVALRQDISAAVVFDRHFQIAKSSLKPALTKEEIDSYSSFMKTSSRALPSHSEAGLKADKGRRNRSDSLSFVKIGVVSSLLLAAAAKYYIMYGDQSVHHIAT* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0429 608 Gene3D - 193 274 - -
Pvu3g0429 608 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 24 534 - -
Pvu3g0429 608 CDD AAA 22 190 - -
Pvu3g0429 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 544 IPR027417 -
Pvu3g0429 608 Pfam ATPase family associated with various cellular activities (AAA) 325 457 IPR003959 GO:0005524|GO:0016887
Pvu3g0429 608 Pfam ATPase family associated with various cellular activities (AAA) 56 190 IPR003959 GO:0005524|GO:0016887
Pvu3g0429 608 Gene3D - 8 191 IPR027417 -
Pvu3g0429 608 Gene3D - 460 551 - -
Pvu3g0429 608 Pfam AAA+ lid domain 480 524 IPR041569 -
Pvu3g0429 608 Pfam AAA+ lid domain 214 256 IPR041569 -
Pvu3g0429 608 Gene3D - 275 459 IPR027417 -
Pvu3g0429 608 PANTHER AAA-FAMILY ATPASE 24 534 - -
Pvu3g0429 608 CDD AAA 291 458 - -
Pvu3g0429 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 274 IPR027417 -
Pvu3g0429 608 ProSitePatterns AAA-protein family signature. 428 446 IPR003960 GO:0005524|GO:0016887
Pvu3g0429 608 SMART AAA_5 52 194 IPR003593 -
Pvu3g0429 608 SMART AAA_5 321 460 IPR003593 -
Pvu3g0429 608 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 60 79 - -
Pvu3g0429 608 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 406 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0429 Pvu-Chr3 4632679 4644813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0429 256 552 Calmodulin-binding Proteins AT3G56690 46.128 1.77e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0429 - - vra:106755317 1079.32