Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0422 ATGGATCGGAGCTCTTACCGGTCGGGAATGCGAAAATCCAATTCTAAACCCGACATATACTCAACCTTCGTCGTTCACGACGACGAAGACGATGACGACGACGGCGTAGACACTAACCGCCGGCATAAATCCGGTGGTGCGCAGCCACGTGACGATCCTTATGCGACCATGGTGTACAAAGACAACGGCCGCGACGACGATGACGACGACGACGAATACTCTTCTCTCCCTCCGCTACTGAAGCGCCTCCCCAAGGACTTCGGCGGCGGAGCGCCGCTAGACTACGATGACGATGATGACGATGCTGGCGATTTCGGCACCATGATCATAAAGAGTGACAATAGACGGCCTCGCGATCGGCCTTCTTCCAGCTTGGCTTCGCCGACGTGGAAGTCTCGGAGCTCGTCTCAGGCGAGTCCTCTGAACAGATTCGGCGAAGAGGACGACGACGGCGATGAGGAAGACGGCGGCGGATTCTCAACGTTCGTCGTTCGTTCGACGGTGAAGTCTAGCGAGAGAGAGTCAGTAAGCGGAACAGTTGTGCGACGGTCCTCCGGCGGTAGCGGTGGCGTCGGTTCGACGATGGAGAGAGCAGTGGCGAGCATGCAGGGGATGGGAGATTTTGGATTCGGAAAGCAGAGGAAGGGAAGTGGATCTTCGCAGAACGATGAGGGAAGGCATCAATCGATAACGACGAAGGTTTCGACGAGTTCGATTCCTGACAGTATTACCAGAGAGGACCCTACTATTAAATACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAGGCAAGGGATTTGAAAACCTCGGAGATGGTTGCTATCAAAGTGATATCGCTATCCGAAGGGGAGGAGGGCTATGAGGAAATCCGTGGTGAGATTGAAATGTTACAACAATGTAATCATCCTAATGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAGTATCTTTGGATAGTGATGGAATACTGTGGTGGTGGTAGTGTTGCTGATTTAATGGGCGTGACTGACGAATCATTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCTCTGAAGGGTCTTGATTATCTGCACTCAATTTTTAAAGTCCACAGAGACATCAAAGGTGGGAATATCTTATTAACTGAGCAAGGGGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACAAGGACCATGTCAAAGCGGAACACGTTCATTGGAACTCCTCATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGCTATGATGGAAAGGTAGATGTCTGGGCTCTTGGCGTGTCTGCTATTGAAATGGCTGAGGGTGTTCCTCCAAGATCTGACGTACATCCAATGAGGGTTTTATTCATGATATCAATTGAACCAGCTCCGATGCTTGAGGATAAAGAGAAATGGTCTTTATATTTCCATGATTTTGTTGCCAAGTGTCTAACCAAAGAACCTCGGCTCCGCCCTACTGCATCTGAAATGTTGAAGCACAAATTCTTTGAAAAGTGGAAAAGTGGATCTGCTGCTATGTTACCAAAATTAGAGAAGGCAAGGGAAATCAGGGCCTCAATGGCTTTGCAGGTGCAAACACTTACTCCAGCAGCATCAGAAGATCAGTTAGTTTCAAAACCAAACGATGAATATGGAGACACTGTTCCATCCAGACCTCATAACATTGGTGTTGAGGGAGCTGCTGATTTGTCATCACATGGCACTATGAGGAAGCTACATAAGGTGGAAGATGTAGACATGAGTGAAGGCAACTTTGGCACTTTTATAGTCCATGCAGATGAGTTACATCAGAAGACTACACAATATGCAGATTCCGCAGTTTCCGACTCTGCTGTACCCAGTGGCACGGGAAGCAGATTAGCTAACTCTGGGATTGAGAATCAGAAAGTTGATTTTATGAACACCACCTCTTTTAGAGGATCTAGTGCTACTACCAATACTATTCAGTCATCTTTACCTTATGCTAGTGATTCAACTGAGCAGAACCTCAAAATCAAAGGCAGTTATCGAGCACCAGCTGGAATGGGTAGTGATATATTCAGGAGTGAAACTGGCAGCCGTAAAGCATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACTGTGCCTATCCCATTCTTAAGGGCAACAGATATATCACCTATTGCTCTCTTGTCAAACAATGTACTTGGTGGTCTGCAACAGGATACTGGTGGAACCGGAACAGTGGAAGCATTGCAAGAGCTTTTCAGTGGTGATGGACAGTCCAAGAAGGGCCGTAGAGGACTAAATGAGATGCCTCTTCCTCAAAGCATTTACCAAAGGTTGACATCAAGTTCTACACTTATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAGGATATGCCATTGCAAGAGTTGCAAGCGACCCAGGAGCAGCGGACTATTCAAAATCTCTCAGACACACTTCGAACCATACTTCGGTTGTAG 2502 0.4712 MDRSSYRSGMRKSNSKPDIYSTFVVHDDEDDDDDGVDTNRRHKSGGAQPRDDPYATMVYKDNGRDDDDDDDEYSSLPPLLKRLPKDFGGGAPLDYDDDDDDAGDFGTMIIKSDNRRPRDRPSSSLASPTWKSRSSSQASPLNRFGEEDDDGDEEDGGGFSTFVVRSTVKSSERESVSGTVVRRSSGGSGGVGSTMERAVASMQGMGDFGFGKQRKGSGSSQNDEGRHQSITTKVSTSSIPDSITREDPTIKYELLNELGKGSYGAVYKARDLKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMGVTDESLDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSDVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFEKWKSGSAAMLPKLEKAREIRASMALQVQTLTPAASEDQLVSKPNDEYGDTVPSRPHNIGVEGAADLSSHGTMRKLHKVEDVDMSEGNFGTFIVHADELHQKTTQYADSAVSDSAVPSGTGSRLANSGIENQKVDFMNTTSFRGSSATTNTIQSSLPYASDSTEQNLKIKGSYRAPAGMGSDIFRSETGSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSNNVLGGLQQDTGGTGTVEALQELFSGDGQSKKGRRGLNEMPLPQSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0422 833 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 193 823 - -
Pvu3g0422 833 MobiDBLite consensus disorder prediction 1 243 - -
Pvu3g0422 833 ProSitePatterns Protein kinases ATP-binding region signature. 258 281 IPR017441 GO:0005524
Pvu3g0422 833 MobiDBLite consensus disorder prediction 163 191 - -
Pvu3g0422 833 CDD STKc_MAP4K3_like 251 506 - -
Pvu3g0422 833 ProSiteProfiles Protein kinase domain profile. 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0422 833 Pfam Protein kinase domain 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0422 833 MobiDBLite consensus disorder prediction 121 142 - -
Pvu3g0422 833 MobiDBLite consensus disorder prediction 214 243 - -
Pvu3g0422 833 Gene3D Transferase(Phosphotransferase) domain 1 249 541 - -
Pvu3g0422 833 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 193 823 - -
Pvu3g0422 833 SUPERFAMILY Protein kinase-like (PK-like) 251 507 IPR011009 -
Pvu3g0422 833 SMART serkin_6 252 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0422 Pvu-Chr3 4539559 4556891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0422 1 833 MAP Kinase Kinase Kinase Kinase AT1G69220 58.776 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Pvu3g0422 Pkinase 4.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0422 - - gmx:100804995 1328.92