Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0416 ATGCCAACCATCACCAATTTCTACTCCATTCAAGATTTATCCCACCACAACACCAAAGATGATTGCTGGATCCTGGTCCATGGAAAGGTATACGACGTGACACAATATTTGGATGATCACCCTGGTGGAGACGATGTAATCCTTGCTGCAACAGGGAACGATGCAACAGAAGAATTTGAAGATGCTGGCCACAGCAAAAGTGCCAGAGAACTTATGGAGCAGTATTGCATTGGTGAGCTCGACCCATCACCTCCAATTTCCACCAATTCTGAAAAGTTCATGCAGCTGACAAAGCAATATTGGGCTGTTCCTGTAACCGCTGTTGGTATCTCTCTGGTAGTTGGTTTCTTATACTTGCGTAAGAAGTAG 369 0.4472 MPTITNFYSIQDLSHHNTKDDCWILVHGKVYDVTQYLDDHPGGDDVILAATGNDATEEFEDAGHSKSARELMEQYCIGELDPSPPISTNSEKFMQLTKQYWAVPVTAVGISLVVGFLYLRKK* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0416 122 PANTHER CYTOCHROME B5 3 121 - -
Pvu3g0416 122 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Pvu3g0416 122 PANTHER CYTOCHROME B5 ISOFORM A 3 121 - -
Pvu3g0416 122 Gene3D - 3 84 IPR036400 -
Pvu3g0416 122 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Pvu3g0416 122 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Pvu3g0416 122 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Pvu3g0416 122 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Pvu3g0416 122 SMART Cyt_b5_2 8 81 IPR001199 -
Pvu3g0416 122 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Pvu3g0416 122 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Pvu3g0416 122 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 86 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0416 Pvu-Chr3 4360628 4364900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0416 1 121 NADPH P450 reductases AT1G26340 53.731 8.56e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0416 K23490 - gmx:100500537 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0416 3 4360628 4364900 Pvu3g0416 3 4360628 4364900 ECH