Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0414 ATGCTCAGCTCGAGGCAATCCTTGTACATCTCTTCCTCTTCTTCTCCTTCTTCTTCTTCTTCTTCATTCTTTTGTATCATTCTCCTCCAACTTACGCTTCTCTATGGCATTGCCTTCTCTGCCAATCATGAAGCCTCAACTCTCTTCTCTTGGCTCCATACTTCTGCATCACCACCACCTCCTTCTTTCTCTAACTGGAACATCCTTCATTCCAATCCATGCAACTGGACATCCATAACATGCTCCTCACTAGGCTTTGTCACTGAAATCAACATACAATCCATCCCTCTAGAGCTTCCTATACCTTCCAACCTCTCTTCATTTCACTCTCTTCAAAAGCTTGTCTTATCTGATGCTAATCTAACTGGAACCATCCCTTCAGACATTGGTGATTGCTCTTCTCTCACTGTCATTGACCTCAGCTCTAACAGTCTTGTTGGTTCAATTCCTGCAAGCATTGGAAAGCTCCAGAACCTTCAGAACTTGTCTTTGAACTCTAATCAGCTTACTGGAAGGATCCCAGTGGAGTTAAGCAACTGCATTGTTTTAAAAAATCTACTCCTTTTTGACAATCAGATAAGTGGGACTATCCCACATGAGCTGGGGAAGTTGTCACAACTTGAGTCTCTAAGAGCAGGAGGGAACAAAGATATAGTTGGGAAGATTCCTGAAGAGCTAGGAGAATGCAGCAATTTAACCGTGTTGGGACTGGCTGATACCAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGTAAGCTCACAAAGCTTCAGACATTGTCCATCTATACCACCATGCTGTCTGGTGAAATTCCACCAGAGTTAGGTAACTGTTCTGAACTTGTTGACTTGTTCTTATATGAAAATAGTCTATCAGGGTCTATTCCATCTGAGCTTGGCAAGCTCAAGAAGCTGGAACAGTTGTTTTTTTGGCAGAATGGTCTTGTGGGGGCCATCCCAGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATTTCTCCTTAAATTCTCTATCTGGGACTATACCTGTATCTGTGGGGGGTCTCTTGAATCTTGAGGAGTTTATGATTAGTGATAACAATGTGTCTGGTTCAATTCCTTCCAGTCTTTCAAATGCTAAAAATCTTCAACAGTTGCAAGTTGACACAAACCAGCTCTCAGGCTTAATTCCACCAGAGCTTGGTCAGTTGTCAAACCTCATGGTGTTCTTTGCTTGGCAGAACCAGCTTGAGGGAAGCATTCCCTCCACTTTGGGGAACTGTAGTAATCTTCAAGCACTAGACTTGTCACGCAATGCACTCACTGGTAGTATTCCTGATGGCCTATTCAAGCTCCAAAACCTCACAAAACTGCTTCTGATTTCCAATGACATATCAGGTTTCATACCAAATGAAATAGGCAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAACAGGATTACTGGTAGCATTCCCGAGACAATAGGCAAGCTAAAGAGCTTGAACTTTTTAGACCTCTCTGGGAACCGCCTCTCCGGTGTGGTGCCTGATGAGATTGGAAGCTGCTCTGAACTGCAAATGATAGACTTCAGCAGCAACAACTTAGAAGGTCCTCTGCCTAATTATTTGTCTTCACTATCAGCAGTTCAGGTGTTGGATGCATCTTCCAACAGGTTTTCAGGTCCTTTACCGGCAAGTTTGGGCCGTCTTGTTTCTCTGAGTAAGCTAATCCTAAGCAATAACTTATTTTCTGGGCCTATTCCTGCATCATTGAGCCTATGCTCAAATCTCCAACTGCTTGATCTTAGCAGCAACAACCTCAGTGGAAACATACCAGCTGAACTTGGCCGCATTGAGACTCTAGAAATTGCTCTTAATCTTAGTTGCAATTCACTCCGTGGAATAATCCCAGCTCAGATATCTTCTCTTAACAAGCTTTCCATATTGGACCTCTCACACAACCAGTTGGAAGGAGATTTGCAACCTCTTTCTGAGTTAGACAACCTTGTATCGCTCAATGTTTCTTACAACAAATTTTCTGGCTGTCTCCCAGATAACAAGCTTTTCAGGCAGTTGACATCAAAAGACTTCACTGCAAATCAAGGGCTCTCATGCTTTGTGAAGGATTCTAGCAAGACTGGTATGTCACTGAACGGAAATGAAGTAAGGAAGTCGCAAAGGCTTAAGCTAGCCATTGGATTGCTGATAGCCTTAACAGTAATAATGATTGTTATGGGGATAACTGCTGTCCTCAAAGCAAGAAGAATCATCAGGGATGATGATTCAGAATTGGGTGACTCATGGCCATGGCAATTCATACCATTTCAGAAGCTAAACTTTTCAGTGGAACAAATACTGAGATGTTTAGTTGATAGAAACATTATTGGAAAGGGATGTTCTGGTGTTGTATATAGAGCGGAAATGGACAATGGTGAAGTCATTGCTGTGAAGAAATTGTGGCCAACAACTATTGACGCAGAAGAGGCATTTAAGGAGGAAAAAAGTGGAGTTCGTGATTCATTCTCAGCTGAGGTCAAGACCCTTGGCTCAATCCGTCATAAGAACATTGTCAGATTCTTGGGGTGTTGTTGGAACAGACAAACGAGATTGCTTATTTTCGATTACATGCCGAATGGAAGTTTGAGTAGTATACTTCATGAGAGGACTGGAAATTCTCTGGAATGGGAACTTAGGTACAGAATCTTGTTAGGTGCTGCAGAAGGCCTTGCATATCTACATCATGACTGTGTCCCTCCTATAGTCCACAGAGATATTAAAGCCAATAATATTCTCATTGGCCTTGAATTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAACTTGTTGATGATGGTGATTTTGGTCGTTCTTCCAATACAGTAGCTGGTTCCTACGGATATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGTGATATTTATAGCTATGGAGTAGTGTTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACCATCCCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAAGGGTCTTGAAGTGCTTGATCCTAGCTTACTCTCTAGACCAGAATCAGAAATAGAGGAAATGATGCAGGCATTGGGAATAGCATTATTGTGTGTGAACTCATCTCCTGATGAAAGGCCAACAATGAGAGATATTGCGGCTATGCTGAAGGAGATAAAGCATGAAAGGGAGGAGTATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATAAAAACTCTGGTGGAGTTCTGCCAACAGCTTCGTCATCAGTACCAGCCATGCAAACTTTGAAAACAAAAAGCAATCACTCAAGCTTCTCTGTGTCTTCTCTGCTCCATTCATCTTCAAGTGTCAAGATGGGTTCCAAATGA 3396 0.422 MLSSRQSLYISSSSSPSSSSSSFFCIILLQLTLLYGIAFSANHEASTLFSWLHTSASPPPPSFSNWNILHSNPCNWTSITCSSLGFVTEINIQSIPLELPIPSNLSSFHSLQKLVLSDANLTGTIPSDIGDCSSLTVIDLSSNSLVGSIPASIGKLQNLQNLSLNSNQLTGRIPVELSNCIVLKNLLLFDNQISGTIPHELGKLSQLESLRAGGNKDIVGKIPEELGECSNLTVLGLADTRISGSLPASLGKLTKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSELGKLKKLEQLFFWQNGLVGAIPEEIGNCTSLRKFDFSLNSLSGTIPVSVGGLLNLEEFMISDNNVSGSIPSSLSNAKNLQQLQVDTNQLSGLIPPELGQLSNLMVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPDGLFKLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPETIGKLKSLNFLDLSGNRLSGVVPDEIGSCSELQMIDFSSNNLEGPLPNYLSSLSAVQVLDASSNRFSGPLPASLGRLVSLSKLILSNNLFSGPIPASLSLCSNLQLLDLSSNNLSGNIPAELGRIETLEIALNLSCNSLRGIIPAQISSLNKLSILDLSHNQLEGDLQPLSELDNLVSLNVSYNKFSGCLPDNKLFRQLTSKDFTANQGLSCFVKDSSKTGMSLNGNEVRKSQRLKLAIGLLIALTVIMIVMGITAVLKARRIIRDDDSELGDSWPWQFIPFQKLNFSVEQILRCLVDRNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTIDAEEAFKEEKSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRQTRLLIFDYMPNGSLSSILHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDIYSYGVVLLEVLTGKQPIDPTIPDGLHVVDWVRQKKGLEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANKNSGGVLPTASSSVPAMQTLKTKSNHSSFSVSSLLHSSSSVKMGSK* 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0414 1131 MobiDBLite consensus disorder prediction 1102 1131 - -
Pvu3g0414 1131 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 20 1124 - -
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 293 338 IPR032675 -
Pvu3g0414 1131 SMART LRR_typ_2 421 445 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 661 686 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 493 517 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 565 589 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 349 373 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 108 132 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 156 180 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 301 325 IPR003591 -
Pvu3g0414 1131 SMART LRR_typ_2 638 657 IPR003591 -
Pvu3g0414 1131 SUPERFAMILY Protein kinase-like (PK-like) 762 1063 IPR011009 -
Pvu3g0414 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 915 927 IPR008271 GO:0004672|GO:0006468
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 439 535 IPR032675 -
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 619 706 IPR032675 -
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 339 438 IPR032675 -
Pvu3g0414 1131 ProSiteProfiles Protein kinase domain profile. 784 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 536 618 IPR032675 -
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 40 197 IPR032675 -
Pvu3g0414 1131 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 1124 - -
Pvu3g0414 1131 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Pvu3g0414 1131 PRINTS Leucine-rich repeat signature 496 509 - -
Pvu3g0414 1131 PRINTS Leucine-rich repeat signature 638 651 - -
Pvu3g0414 1131 Gene3D Phosphorylase Kinase; domain 1 770 870 - -
Pvu3g0414 1131 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Pvu3g0414 1131 Pfam Leucine rich repeat 620 674 IPR001611 GO:0005515
Pvu3g0414 1131 Pfam Leucine rich repeat 110 169 IPR001611 GO:0005515
Pvu3g0414 1131 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Pvu3g0414 1131 ProSiteProfiles Leucine-rich repeat profile. 640 662 IPR001611 GO:0005515
Pvu3g0414 1131 SUPERFAMILY RNI-like 366 696 - -
Pvu3g0414 1131 SUPERFAMILY L domain-like 55 409 - -
Pvu3g0414 1131 Gene3D Transferase(Phosphotransferase) domain 1 871 1080 - -
Pvu3g0414 1131 Pfam Protein tyrosine and serine/threonine kinase 788 1061 IPR001245 GO:0004672|GO:0006468
Pvu3g0414 1131 SMART serkin_6 784 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0414 1131 Gene3D Ribonuclease Inhibitor 198 292 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0414 Pvu-Chr3 4318650 4322905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0414 39 1093 Receptor kinase-like Gene Family AT5G56040 49.021 0.0 985
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu3g0414 PK_Tyr_Ser-Thr 4.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0414 - - gmx:100818541 1933.69