Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0405 ATGACCAAGACACTGGAACGGTATCACAGATGCAGCTATGGAGCCTTGGAATTACACCACCAACCTGAAATAGAGACACAGAGACGCTACCAAGAGTACCTGAAGCTAAAATCCAAAGTGGAGGCACTGCAGCAAACACAAAGAAACCTCCTTGGTGAAGAATTGGAGCACTTAGATGTTAAGGATCTTGAACAGCTTGAGCGTCAGCTGGACTCTTCCCTGAAGCAAATCAGGTCTAACAAGACACAACAGATGCTTGATCAACTCTCTGATTTGCATAGAAAGGAAGAGATGCTGCTGGAAACTAATAATATCCTGAGGAACAAGTTGGAGGAAATCAATGTAGCCCTTCAACCAACATGGGAAGCTAGGGAGCAAAATGCTCCCTACGATGGCCACCCTCACCCATCAGAGGGATATTATGAGACAGCACATTGCAACAGTACATTGAGAATTGGATATGATTCTTCAGGGTTAAATGAAGCAGGAGGAGCTGCAGGAACCTCAGCCCAAAATGCTAGTGACTTCATGCATGGATGGATGAGCTGA 549 0.4536 MTKTLERYHRCSYGALELHHQPEIETQRRYQEYLKLKSKVEALQQTQRNLLGEELEHLDVKDLEQLERQLDSSLKQIRSNKTQQMLDQLSDLHRKEEMLLETNNILRNKLEEINVALQPTWEAREQNAPYDGHPHPSEGYYETAHCNSTLRIGYDSSGLNEAGGAAGTSAQNASDFMHGWMS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0405 182 Coils Coil 60 83 - -
Pvu3g0405 182 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 1 168 - -
Pvu3g0405 182 MobiDBLite consensus disorder prediction 162 182 - -
Pvu3g0405 182 MobiDBLite consensus disorder prediction 162 176 - -
Pvu3g0405 182 Pfam K-box region 25 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu3g0405 182 ProSiteProfiles K-box domain profile. 26 116 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu3g0405 182 PANTHER MADS BOX PROTEIN 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0405 Pvu-Chr3 4103708 4111904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0405 1 153 MADS-box Gene Family AT5G15800 53.459 6.76e-46 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0405 K09264 - gmx:100811049 345.51