Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0399 ATGATGGAATCCCTCATGATAGAGTCCAGTAGGAATGGTATCACTAGTTGTGTACTACTGCACCTCTTTTTGTTTTTACCATTCATCCATTTAATCACTTGTGATCCAATTAATGTCCCGGACAAAATCCTCCTAAACTGTGGTTCTTATGAAGCATCATCATTCAATGGAGAAAATTGGATAGGAGATAGCGGATCTAATTTCTTGCCTCCAGAGTATGACAAGAGCTCATCTGCAGTCTTGCTCTCAAACATGGAAGACTCTCTAGCCCCAAAAGTTCCATTCTCAACAGCAAGAATAACTCATTCTTCATTGACCTACTCCTTCCCTTCCTCCCCTGGCCTTAAATTCATTCGCCTTTACTTTCTTTCATCTTTATATCTGAAGATGAACCCCTCCAACAAGGCTTATTTCTCTGTAAAAGCGGGGCCCTACACTCTTGTAAGTGATTTTAATCCATCTGTTTTTGCAGAAGAGCTCAACTCGAAGTTTTTCACCAAGGATTTCTTAGTCAAAGTTAGGGAAGACAAACTGACCATTACATTTACTCCATCTCCTTTAATTTCCAAAGCATTTGCTTTTGTAAATGGCATTGAGACATTCCCGGTGCCCAAAAGTATATACTTTCCGGGTTCCAAGGTTCCTGTTCCTTACCTTGGGCACCAGCAAATTTTATTGACTAATGATGAATATGCTCTAGAGACGTTTTACAGAGTTAGCAATGTTGGTGAAGATGTTGATTCTCAAAATGCTTTTGGAATATGGTTAAATGATTTTAGATACATATCTGGTTCACACTATGGAAGTGTCCTCAATATAAAGTCTCGTACTGTAAATTTGAATTACACCACTTCTTCTTCAAAGGATTACAATTATTCAGCACCATCAGAGCTATATTGGACTGCCAGGACAATGGGTAGTGGTGGAGATGATAACACGAAGTACAATTTAACATGGTCTTTCCCTGTTGATTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATCTCTACGGTGGTAACGCAGCCCAATCAAAGGGTGTTCAAAGTGTACATAAACAACCAAACAGCAGAGGAGAGAATGGACGTAGTTGCTTCAGCCGGAGCACCATTTACTCCTTTGCAAAAGGACTATATTGTTATGGTTCCTATGGAAAGTGGGAGCAGGAAAGATTTGTGGATCTCACTTCACCCTAACTTGGAGTCAAAACCAAAATATGCTGACGCCATACTGAATGGAATTGAGATTATGAAGATAAGTGATAGTAATCATAGTCTGGCAGCAATGTTCCAATTGAGAAGGGAACAAAGAAAGAAGGTTCAACATGTCATTATTGTGGCCGTTGCTACTTTAGGTACCATCTTGGGACTGCTCTTCACATTTTTCATTCTTATCCTCAGAGCAGGGAAAAAATTGAAGTTACTCCCATCAAATTCTAGTAGTACTCACAAAATCATTCAACCCACAGTAACCTCAGGTCTTTGCCATCAATTCACACTTGCAGAAATCAGCATAGCTACAAGCAACTTCAGTGAAGCTCTTGTCATCGGGGAGGGAGGCTTCGGAAAGGTGTACAGAGGCATCATGCATCATGATGGAGTCATTGCTGTCGCGGTAAAGCGCTCTATTCGTAGTTCTGGCCAAGGATATAAAGAGTTTCAAAATGAGATCAATTTTTTCTCATTCTGTCACATGAATCTAGTCTCACTGCTAGGGTACTGCCAAGAGGGAAATGAAATGATACTGGTGTATGAATACATGGCTGAGGGTCCTCTGTCTGACCACTTATACAAGAAAAAAAATCAGCCGTTGCCTTGGATTCAAAGAATAAAGATTTGTATTGGTGCAGCTAGAGGACTACATTACCTCCACACTAGCACAAGGCACCCAGTGATTCACCGTGATGTGAAGTCAGCCAACATATTATTGGATCAGAATTGGGTAGCCAAGATTGCAGATTTTGGATTGTGTAGAACAGTTCCCTCACTTTACCATTCACATGTTAGCACTGAGGTTAAAGGTACTTTTGGATATTTAGACCCTGAGTACTATAAGAGAAGAAAACTGACTCAAAAATCTGATGTGTATTCATTTGGAGTGGTTTTGTTTGAGGTGTTGTGTGGAAGAGCAGCTGTGAATACTGTGGCAGTGGAAGAGGAAAGTGAGAAAGTTGGGTTGGCCACATGGGCCATGCACTGTTACAAGTGTGGAAGCATTGATGAATTAGTTGATCCTCATTTAGCAGGGAATGTTAGGCCAGAATGCCTGAGGGCGTTTGTGGAGATAGGCATCCAGTGCTTGGCTGGTAGAAGTACGGATAGGCCAACTATGGGAGAGGTCCTCAATAGTTTAGAGAGGATCCTTTTCCTTGCACGATAG 2385 0.4105 MMESLMIESSRNGITSCVLLHLFLFLPFIHLITCDPINVPDKILLNCGSYEASSFNGENWIGDSGSNFLPPEYDKSSSAVLLSNMEDSLAPKVPFSTARITHSSLTYSFPSSPGLKFIRLYFLSSLYLKMNPSNKAYFSVKAGPYTLVSDFNPSVFAEELNSKFFTKDFLVKVREDKLTITFTPSPLISKAFAFVNGIETFPVPKSIYFPGSKVPVPYLGHQQILLTNDEYALETFYRVSNVGEDVDSQNAFGIWLNDFRYISGSHYGSVLNIKSRTVNLNYTTSSSKDYNYSAPSELYWTARTMGSGGDDNTKYNLTWSFPVDSGFKYLVRLHFCEISTVVTQPNQRVFKVYINNQTAEERMDVVASAGAPFTPLQKDYIVMVPMESGSRKDLWISLHPNLESKPKYADAILNGIEIMKISDSNHSLAAMFQLRREQRKKVQHVIIVAVATLGTILGLLFTFFILILRAGKKLKLLPSNSSSTHKIIQPTVTSGLCHQFTLAEISIATSNFSEALVIGEGGFGKVYRGIMHHDGVIAVAVKRSIRSSGQGYKEFQNEINFFSFCHMNLVSLLGYCQEGNEMILVYEYMAEGPLSDHLYKKKNQPLPWIQRIKICIGAARGLHYLHTSTRHPVIHRDVKSANILLDQNWVAKIADFGLCRTVPSLYHSHVSTEVKGTFGYLDPEYYKRRKLTQKSDVYSFGVVLFEVLCGRAAVNTVAVEEESEKVGLATWAMHCYKCGSIDELVDPHLAGNVRPECLRAFVEIGIQCLAGRSTDRPTMGEVLNSLERILFLAR* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0399 794 Gene3D Phosphorylase Kinase; domain 1 475 588 - -
Pvu3g0399 794 Gene3D Transferase(Phosphotransferase) domain 1 589 792 - -
Pvu3g0399 794 PANTHER OS07G0166700 PROTEIN 40 792 IPR045272 GO:0004714|GO:0006468
Pvu3g0399 794 ProSiteProfiles Protein kinase domain profile. 512 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0399 794 SUPERFAMILY Protein kinase-like (PK-like) 483 786 IPR011009 -
Pvu3g0399 794 Pfam Protein tyrosine and serine/threonine kinase 517 784 IPR001245 GO:0004672|GO:0006468
Pvu3g0399 794 Pfam Malectin-like domain 45 421 IPR024788 -
Pvu3g0399 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Pvu3g0399 794 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 40 792 - -
Pvu3g0399 794 CDD STKc_IRAK 518 789 - -
Pvu3g0399 794 ProSitePatterns Protein kinases ATP-binding region signature. 518 542 IPR017441 GO:0005524
Pvu3g0399 794 SMART serkin_6 512 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0399 794 Gene3D - 232 422 - -
Pvu3g0399 794 Gene3D - 43 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0399 Pvu-Chr3 4055283 4058105 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0399 31 792 Receptor kinase-like Gene Family AT3G51550 43.532 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu3g0399 Malectin_like 2.2e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0399 - - gmx:100776324 1171.38