Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0370 ATGAAGATTAGTTGTAATGGGTGTCGCATTCTTCGCAAAGGTTGTACTGAGGACTGTGTTATTAGGCCATGCCTTGAATGGATAAACTCTTCTGAGGCACAAGCCAATGCCACCCTTTTCCTTTCTAAGTTCTATGGTCGTGCCGGTTTGCTCAACCTCATCAATGCTGCCCCACAACACCATCGCACTGATGTGTTCAAGTCACTGATGTATGAGGCGTGTGGGAGAATCATGAACCCAACATTTGGATCAGTAGGTTTGTTTTGGAGTGGTGAGTGGGCCCAATGCCAAGCTGCTGTTGATGCTGTGCTAGCTGGGTCCCAGATCAATGTCATGACAACCTCTCATTCACAAGTGATGGTGGCACATGGCAGTGAGCATGCTTCCAAACTCCTTGACATACGTCATGTTGTCAAAGATGCCAACATGGACAAGGTAAAAGGAAAATCTAAGAAACCTAATAGAACTGAGAATGTTATGATGCCAATGTCTCATGTGGGTTTGGTCAACTCAGCTACATTATGGAACCCAATTTTAAGCCATGAGCCAAGAAGGTTAGAGGGTGGTGGTGAGGAAATAGTGAGGGCTATGTTGTTGAGCCAAGACAAGCCAAGTATAAATGGTGGAAACAACATTGATTTGGAGCTCACTCTTGGCTAG 660 0.453 MKISCNGCRILRKGCTEDCVIRPCLEWINSSEAQANATLFLSKFYGRAGLLNLINAAPQHHRTDVFKSLMYEACGRIMNPTFGSVGLFWSGEWAQCQAAVDAVLAGSQINVMTTSHSQVMVAHGSEHASKLLDIRHVVKDANMDKVKGKSKKPNRTENVMMPMSHVGLVNSATLWNPILSHEPRRLEGGGEEIVRAMLLSQDKPSINGGNNIDLELTLG* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0370 219 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pvu3g0370 219 PANTHER LOB DOMAIN PROTEIN 1 219 - -
Pvu3g0370 219 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Pvu3g0370 219 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0370 Pvu-Chr3 3607760 3609168 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0370 1 218 AS2 family AT3G02550 45.455 7.55e-65 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu3g0370 LOB 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0370 - - gmx:100789066 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0370 3 3607760 3609168 Pvu3g0370 3 3607760 3609168 ECH