Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0366 ATGCTGGAGGCTCTTAACCAATCCGCCAAAACGATGAAGAAATTGAAGCAGAAACGAAATCCATTTCATGACTCCAAAATGGCAAGGAAACTGCGCATCATTTGTGATGATCCTGATGCTACCGACTCATCATCGGATGAAGAGGAGCATTTTGGGAAAGGTAGGAAGGTGAGGAGAACTGTGGTTGACATTGCTCTTCCACCAGTTCCAGTTAACTCTGTCATTGCAGCTGCTGAAACCAGCACCCAGAGTTCAAACAATGGGGAACTGAACAAGAAGATGGTCCTGGCCAAAACACCCTCATCGAAGAGGCCATCTGCTGGGAAATACAAAGGTGTTCGGATGAGGAAATGGGGCAAATGGGCTGCAGAGATTCGCGATCCTTTCAAGGGTGCGCGTGTCTGGTTAGGCACTTACAACACTGCAGAAGAGGCCTCTCAGGCCTATGAGTCCAAAAGGCTTGAATTTGAAACCATGGCCAAGACTCTATCTAATTCGAGGAGCAACAGCACCAGCAACAACAAAAACACAGACAGCAGCAACAATGTTGTTGCTTCTGTTGTAACTGTAGCTGCCCCAGAAAATAACAACAACTCCAACTACTGTGTTTCTTCTGCTGCACATTCTGTATCAGATTCCAAATCTGCTACTATAGACTACTCAGACAGCAGCATTCTGTCACACACATCACCATATTCTGTGCTTGAGTTGGAAACCTCTGCTTCCAAGTTGACTGAGAGTGGTAAGGTTTCAGGCAGTGAAGTTGTTGAAACTGAAGATCTGTTCACTGAATTTGCTGAGCTAGACATTCCTGATTTGAGCATGCTGAGTGTGCCACCCCCATCTGCAGTTGCTGCTGTTCCATCTGAGTTTAAATTCGATTGGTTGGCATTAGACGGTTTGGAGCATGGACTTGATCAAGAGTTTGGGTTTGATGAGGATCTTGGTGACTTGGAAGACATAAAGATTTGTGGATTTGATGACAGTGAGCCCAGTGAGCTTCCTGATTTTGATTTTGATGACTTTGGTGCTGATGAGTTTGCTGGTTGGATTGAAGAACCCCCAAATATACCTTCAGTATAA 1083 0.4515 MLEALNQSAKTMKKLKQKRNPFHDSKMARKLRIICDDPDATDSSSDEEEHFGKGRKVRRTVVDIALPPVPVNSVIAAAETSTQSSNNGELNKKMVLAKTPSSKRPSAGKYKGVRMRKWGKWAAEIRDPFKGARVWLGTYNTAEEASQAYESKRLEFETMAKTLSNSRSNSTSNNKNTDSSNNVVASVVTVAAPENNNNSNYCVSSAAHSVSDSKSATIDYSDSSILSHTSPYSVLELETSASKLTESGKVSGSEVVETEDLFTEFAELDIPDLSMLSVPPPSAVAAVPSEFKFDWLALDGLEHGLDQEFGFDEDLGDLEDIKICGFDDSEPSELPDFDFDDFGADEFAGWIEEPPNIPSV* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0366 360 SUPERFAMILY DNA-binding domain 109 156 IPR016177 GO:0003677
Pvu3g0366 360 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 358 - -
Pvu3g0366 360 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF119 10 358 - -
Pvu3g0366 360 CDD AP2 109 156 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 Gene3D AP2/ERF domain 108 165 IPR036955 GO:0003700|GO:0006355
Pvu3g0366 360 SMART rav1_2 109 170 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 MobiDBLite consensus disorder prediction 162 181 - -
Pvu3g0366 360 PIRSF PTI6 4 269 IPR017392 GO:0003700
Pvu3g0366 360 PIRSF PTI6 223 350 IPR017392 GO:0003700
Pvu3g0366 360 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Pvu3g0366 360 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0366 Pvu-Chr3 3558866 3561380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0366 11 357 AP2-EREBP Transcription Factor Family AT1G68550 33.427 2.61e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu3g0366 AP2 2.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0366 - - var:108335041 510.76