Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0338 GGGAATTACAAATATTCTGAATATAGTCTACTCTTCAAGTGTTTTACTAAAAAAGTTTATAAGATTTTTCCACGGGAGAAGATTATCAAATATTTGCATGCAAGAGTTTGCTGTGTTAGGGAGGAATGTATATGTACTTGTGAATGGAACGAAAGACTATTATCTCATTTTGAAATTTGTACAAATGATGATTGTTTGATATGTGAGCGTTGGAAAGAAGAAGCTCATATTATTTCTAAGGGTCATTTGAGCCCGGTTAAAAGAAAAAATGATTGCCCTTCTGAAGTCATGCTACCACTAACCAAAAGAAGAAAAGTGGAGTCTGAAACTGAGTGCAAGGTGGAACAAATTACAACCACAGTGTTTGATTCTGGAAGTAATACTCAAATAATGAATGGTATAGAAGAAGCTGATAACATGTTAAGTTCAGAGGAACCAACAAAAAACCATGATGACCTGATAGTTAACGAAGATGCTATGGCTGTATCTGATTCTCACATGGAAACTTCATCAAATACAGAGGAAATAGAAGGCAAAAGTGGATTCAACCAAGATGAATTCAATGCTACAGAGGAAGTCATTGAGCCAAAATCTCCAGAAAAGGAAATGAAGACCACAAATCCAACCGCTAATACTACTGTTTCCTCAACTGAATCTTTAGCAAGAAGTAGAATAAAGGAACACATCGAAAGTCTCAGAAAGCAATATAATAAGGTTATAACTGAGGAAGAATCAGGAAGTGATGCTTACAAATGCCAATTATGTTCAATGGCAACGCTACACTATGCCCCCCAGCCAATTTATTGCTTTTGTTGCGGCAACAGCATTAGGCGTAATGCACATTATTACTGTAAAAGAGAAGAAGAGGATACGGATAATTGCTTTTGTGCTACATGTTATAAGAATGGTCGAGGTGGAAACATCACATGCAATGGCACAACTGTTTCCAAGACAGATCTTAACAAAAAAGAGAATAACAGAAAATGCGAAGAAGCGTGGATTGAATGTAGTAAATGCAAAAGGTGGCAGCATCAAATATGCGCACTCTATAACGACAAAAGAGATTTGGATAGCAGTGCTGAATATGTATGCCTTTTATGCTGCATAAACGAAAAGAGAAAAGATGATGCGCGTGTACCTTTTGATGCTAAAGACTTGTCCAAAACCATGCTCAGTGATCACATAGAGGAGAGGCTTTTGAAGCGTCTAGCTAAAATTGGGCTAAAACTTCCAGAGCTTTTTGTTAGAGTTGTGTTATCTGTGGACAAGCAAATTGAAGTGAAGAAACAATTTCTCAACATCTTTGAGAAACAGGATTATCCTGCAGATTTTTCTTACACATCAAAAGTTATTCTTCTCTTCCAAAAGATTGATGGAGTGGATCGTTCTCTCTATGTTTCATATCTTGATTCGGTTAAGTATTTAAGGCCTGAAATAATGATTTCGGCTAAAGAATCTCTCCGTACCTTGGTTTATCATGAGATATTGGGAGAAGATTATATATTCTATTGTCATCCTGAATTTCAAAAAACTCCGAAAAAAGATCAACTACGACATTGGTATCATTCAGTACTAAGAAAGGCTGGCGAAGAAGATATCGTGGTTGGTTTATGTAACATGTACGATTATTTTTTTCTTTCTACTGGAAACTGTGAATCCAAGGTTACGGCTGCTGGTTTACCTTACTTTGACGGGGACTTCTGGTCTGGTGCTGCAATGGATGAAGCCAGCCAGATTGAACAATGTACGGGAGGAGACCGTGAAAAGATGTTGAAATTAATACCGAAAAGATCTTTAAAGTCTATGGGAAATGTAAATCTTTCAAAAGGAACGGCCAAAGACATTCTAATTATGCAAAAGCTGAGACAAACCATATCACCTTTCAAGGAAGATTTTATGGTAGTTCAACTTCAGTATGTTTGCATCCACTGCCATAAAGTGATAGAGTGTGGGAAGCGATGGTTTTGCACGGAGTGCAAGATATTTCAGGAGTGCGAAAGATGCCACAGTGCTAATTCACACACTTCTGCCAAAGGAGAGAAGCACAAACTTTGTGAGGAGAAAGATATTATCTTTGATAATGGGTTATTTGGTAACCGATACAACTTTCTTAGCTTTTGCCAAAGGAATAGGTTTCAGTTTGATTCACTCCGGCGAGCCAAGTATTCCTCAATGATGATCCTCCATTTCTTGACCAACCCTACGACTGAAACTTGTTCAGCAGAATCTCCTTTGGGGAGTCAAAAGTTAAAGCAGATTTTCCCTTATAATTTCCATTTGCAGGAACGGTTGTTGGATGTTATGAAGCACGCATCCCCGTGTCATCCAACTCAAAGTAAACCATGCACCTACCCATACTGTCTTAAAATTAGAAAATTATTTGGTCATGCGAGTAGGTGTAGTGTTGGAGTTTCTGGAGGATGTCAATACTGTAAGAAGGTTTGGCAGGGAATAGCTTTACACGGAGTTAAACAAGTACAAGGGCTTGCATCCCAATCTGAATCACAACGTAGAGCTGCAATTTTGGAAGACAACAAACCTTTCGCAGTTGATTGA 2556 0.3799 GNYKYSEYSLLFKCFTKKVYKIFPREKIIKYLHARVCCVREECICTCEWNERLLSHFEICTNDDCLICERWKEEAHIISKGHLSPVKRKNDCPSEVMLPLTKRRKVESETECKVEQITTTVFDSGSNTQIMNGIEEADNMLSSEEPTKNHDDLIVNEDAMAVSDSHMETSSNTEEIEGKSGFNQDEFNATEEVIEPKSPEKEMKTTNPTANTTVSSTESLARSRIKEHIESLRKQYNKVITEEESGSDAYKCQLCSMATLHYAPQPIYCFCCGNSIRRNAHYYCKREEEDTDNCFCATCYKNGRGGNITCNGTTVSKTDLNKKENNRKCEEAWIECSKCKRWQHQICALYNDKRDLDSSAEYVCLLCCINEKRKDDARVPFDAKDLSKTMLSDHIEERLLKRLAKIGLKLPELFVRVVLSVDKQIEVKKQFLNIFEKQDYPADFSYTSKVILLFQKIDGVDRSLYVSYLDSVKYLRPEIMISAKESLRTLVYHEILGEDYIFYCHPEFQKTPKKDQLRHWYHSVLRKAGEEDIVVGLCNMYDYFFLSTGNCESKVTAAGLPYFDGDFWSGAAMDEASQIEQCTGGDREKMLKLIPKRSLKSMGNVNLSKGTAKDILIMQKLRQTISPFKEDFMVVQLQYVCIHCHKVIECGKRWFCTECKIFQECERCHSANSHTSAKGEKHKLCEEKDIIFDNGLFGNRYNFLSFCQRNRFQFDSLRRAKYSSMMILHFLTNPTTETCSAESPLGSQKLKQIFPYNFHLQERLLDVMKHASPCHPTQSKPCTYPYCLKIRKLFGHASRCSVGVSGGCQYCKKVWQGIALHGVKQVQGLASQSESQRRAAILEDNKPFAVD* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0338 851 MobiDBLite consensus disorder prediction 198 222 - -
Pvu3g0338 851 CDD PHD_HAC_like 295 367 - -
Pvu3g0338 851 Pfam TAZ zinc finger 762 821 IPR000197 -
Pvu3g0338 851 MobiDBLite consensus disorder prediction 203 220 - -
Pvu3g0338 851 SMART TAZ_2 755 831 IPR000197 -
Pvu3g0338 851 SUPERFAMILY FYVE/PHD zinc finger 330 370 IPR011011 -
Pvu3g0338 851 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 380 736 IPR031162 GO:0004402
Pvu3g0338 851 Gene3D TAZ domain 756 826 IPR035898 -
Pvu3g0338 851 SMART KAT11_2 395 648 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu3g0338 851 SUPERFAMILY TAZ domain 758 821 IPR035898 -
Pvu3g0338 851 SUPERFAMILY RING/U-box 616 678 - -
Pvu3g0338 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 327 371 IPR013083 -
Pvu3g0338 851 Gene3D - 634 684 IPR043145 -
Pvu3g0338 851 PANTHER CBP/P300-RELATED 158 822 IPR013178 GO:0004402|GO:0006355|GO:0016573
Pvu3g0338 851 PANTHER HISTONE ACETYLTRANSFERASE HAC2 158 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0338 Pvu-Chr3 3203316 3207247 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pvu3g0338 zf-TAZ 1.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0338 K04498 - gmx:102664049 845.884