Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0330 ATGAAGACTCGTGTTATAAAAAACAACTGCAATCCTACGTGGAATGAAGAAATGACCCTTTTTGTAAAGAACGTTGAAACCCCAATACAATTGACAGTTTTTGACAAAGACACTTTCACTGTGGATGACAAAATGGGGGAGGCAGAGATAGACTTTAAACCCTTTCTGAAGTGTAAAAAGATGGAAATGAAAAACCTCCCAAATGGTTGTGCACTGAAGAGGATCCAACCAAGTAGAACTAATTACCTTTCTGAAGAAAGCAGCTGCATTTGGAAAGATGGTGATGTTATTCAAGAAATGATTTTGAGATTGAAAAATGTTGAGAAGGGAGAACTGGTTGTGGAAATTGAGTGGGTTGATGTTATTGGTTTTAGGGGCTTATCGCATGTAAAACTTTGA 399 0.3734 MKTRVIKNNCNPTWNEEMTLFVKNVETPIQLTVFDKDTFTVDDKMGEAEIDFKPFLKCKKMEMKNLPNGCALKRIQPSRTNYLSEESSCIWKDGDVIQEMILRLKNVEKGELVVEIEWVDVIGFRGLSHVKL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0330 132 Pfam C2 domain 2 56 IPR000008 -
Pvu3g0330 132 Gene3D C2 domain 1 89 IPR035892 -
Pvu3g0330 132 ProSiteProfiles C2 domain profile. 1 65 IPR000008 -
Pvu3g0330 132 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 124 - -
Pvu3g0330 132 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 124 IPR044562 -
Pvu3g0330 132 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 65 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0330 Pvu-Chr3 3083930 3085859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0330 1 129 C2H2 Transcription Factor Family AT1G70790 61.832 1.08e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0330 - - gmx:100792328 206.068