Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0319 AACAAAGTGTTTGCCCCACTGCACTCCAACGTCTTCCTTTTATTTTTTTTCCTGTCTCTCTCTGTCGGTATCATGAGACCACAAAATAACCCATTAGATCTCAACAACTTTCCCGATGAGTACTCCCGAGATGGCTTACAACTCTTCCAAGATAGTTCCTCATCTGAAGGATACAGGAAAAAGAAAAACATCTTGAAGGAAGATGAGAGTGAGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCACAGGCTCTTGGAGGACACATGAACCGCCACCGCCAAGAGAGGGAAACAGAGACACTGAACCATGCTCGTCAGCTGGTCTACCGTAACGATCATAACCTAAGCACTCAACCCGCCCCCAACCTAGTATGCTGTCAACCAATAGCATCAGGGGGCTATCATGCTGCAAGTAGCATAGGAGACCCAACAATGCATGCAAGGTTCCCAAGATACATGTCGGGTTCGGGTTCGGGTTCGGGTTCATCTTCATTCCACTTACCAACTCCACCACCACAGCTCCACCTACAACAACCATCTCATCATCTCCTACTAGGCTCACCTCCACCACCACCGCCACCACCCCTTCCTTTTCCCTTGCCGTATTCTCACCACCCTCATGACTACTATGTGGGGCATGTTCTGAACAGCGGCAGCAAAAATGGCATCCTCAATGACTACACTTGCATTGGGGCACCCGTAGGACAAGCATTGGTGGGTGGTGGCAAAGACAGGTCAGTGCAGAATCCTGAGGAGGAGACGTTGAATTGGGGAAGGGGCTATTCAGGAACACAGCAGCTATTGGATACTCATGCAGCGATCAATCGGTGTCACGAAGGGTTTTAA 858 0.4895 NKVFAPLHSNVFLLFFFLSLSVGIMRPQNNPLDLNNFPDEYSRDGLQLFQDSSSSEGYRKKKNILKEDESEKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNHARQLVYRNDHNLSTQPAPNLVCCQPIASGGYHAASSIGDPTMHARFPRYMSGSGSGSGSSSFHLPTPPPQLHLQQPSHHLLLGSPPPPPPPPLPFPLPYSHHPHDYYVGHVLNSGSKNGILNDYTCIGAPVGQALVGGGKDRSVQNPEEETLNWGRGYSGTQQLLDTHAAINRCHEGF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0319 285 Gene3D Classic Zinc Finger 51 124 - -
Pvu3g0319 285 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Pvu3g0319 285 SUPERFAMILY beta-beta-alpha zinc fingers 70 102 IPR036236 -
Pvu3g0319 285 PANTHER ZINC FINGER PROTEIN JAGGED 25 262 IPR045320 GO:0003700
Pvu3g0319 285 PANTHER ZINC FINGER PROTEIN JAGGED 25 262 IPR031113 GO:0007275
Pvu3g0319 285 MobiDBLite consensus disorder prediction 159 175 - -
Pvu3g0319 285 MobiDBLite consensus disorder prediction 153 200 - -
Pvu3g0319 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0319 Pvu-Chr3 2974106 2976689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0319 28 239 C2H2 Transcription Factor Family AT1G13400 38.865 8.69e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0319 - - vra:106776856 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0319 3 2974106 2976689 Pvu3g0319 3 2974106 2976689 ECH