Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0309 ATGTTAGGCTTCCATTTTCTTGTCTCTTGTTTCATGTTTCTTGTCTTGAGTGCAGCAGCTCAGGGGGAACAGCACCAAGAGTGCTTTGATTCTCCTGTTCAACCATGTGGGTATCTGGGGGAAATCACCTTCCCCTTCACAACAAGTTCCGATCCAAAATGTAGTGGGTTCCGAATAAGGGGCTGTGACGACGACACTGTTGATAAAGAAATCTCACTCACAGACCAAAATTGGTATAAAATTGTTACCATATTTCATTCTCCCGACCTCAATAACCTTTCAATCATCATCCGTTACCCTGATTTTGACACACCAAAGCAGCTTCAAAAGCCTTTCGAGATAGAAGAAAAGCATTTCAAGATCGGCAACAACATTAGCTTCTTCGGATGCCTGCGGAACTCCTATGACAACGATGTCGTAAGCTCTTCAAACATGTTCCTTTACAGACACTGTCCTTACCACGACATGTACTACAATTCTACCCTGCGTCTCGACTATCCCTTGCCCTTCAATCCATTCACATGCTTGCTTTTTCAGCTTCCTCAATTTGGATCTTTTTGCGCTTGCCCTTCGTGTACATTTCTGTTTTCTTTTCTCGAAATTAAATTAAACATACCCGAAGACTGCAAACGCTGTCAGCGTCCCCAATGTGAGTTTGAGTTTGTGGAGGGACAAGGCCTCAAATGTTACCGACACGATCATCATGCACCACCTCCTCCTCTTTCCTCGCCTTCTCCGGTTAGTTCACCTGCAACGGGCAAGGCTAAGAAAATAGGTTTATACGTTGGAATACCAATCTCGATTGCAGTTTTTGCCTTGGTGGTGGTTATTGTTTTGGTTTTGAAAGGAAGAAAGAAAGATTCAGGCCTGGAAAAGAAATCAAGAAGTGGTTATTCTTCTTCCTTGAGAAATAGAACGTCCATGGAAAGTGGAGGTGTCTACTTTGGGATCCCTGTCTTCTCCTTCGACGACCTCCGAGAGGCAACCAACAACTTTGATCATGCAAGGAAGCTTGGAGAAGGAGGCTTTGGAACTGTTTACTTTGGAATACTTGGAGATGGTCGAGAAGTTGCAGTGAAGCGGCTGTTCGAGCGCAACTACAGGCCAGTGGACTCATTCACCAACGAAATTCAGATCCTCACTCGTCTGCGACACAAAAACCTGGTCTCCCTCTACGGCTGCACTTCGCGTCACAGCCGCGACTTACTCCTCGTGTACGAGCACATCCCAAACGGCACACTCAGTTCTCATCTCCATGCTGATCAAGGAAACTCACACCTTTTGCCATGGCATTTGAGAATGAAAATCGCAGTGCAAACCGCGAGTGCATTGGCTTATCTCCACGCTTCCGACATCATCCACCGGGATGTGAAAACCAGCAACATTCTCCTCGACAATGAGTTCGATGCTAAGGTTACGGATTTTGGTCTTTCGAAACTGTTCCCTGATGATGTCACTCACATTTCCACTGCTCCAAGGGGGACCCCGGGTTATGTTGATCCGGATTATCGCCTGTGCCACCAGCTCACAACAAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTTGAGCTGATATCATCTCTCAAACCAGTTGACATGAACAGGAACAGAGAAGACATTAAGTTGGCAAATCTTGCCATTAGGAAGATTCAAATGGGGACATTTTTTGAGATGGTTGATCCTTCCCTTGGTTTTGAGTCAGATGAGAAACTGAAAGTGATGATAGGTTCGGTTGCAGAGTTGGCTTTTCAGTGTCTGCAGGAGGAGAAGGAATTGAGACCCTCTATGGGGGAAGTGTTGGAGGTGCTGGAGAGAATTCACAGTGGCAGGGATGAGGCAGGGAATCTGGAGGGGATTGTGGTTCATGGTGCTACCAGGGCTTCTCAAAGCTATGCTCACCCACCTCTTCCTAACTCTCTTGTGATCCCACAACAGGCCCTTTGGAAAACAAACTGA 1959 0.462 MLGFHFLVSCFMFLVLSAAAQGEQHQECFDSPVQPCGYLGEITFPFTTSSDPKCSGFRIRGCDDDTVDKEISLTDQNWYKIVTIFHSPDLNNLSIIIRYPDFDTPKQLQKPFEIEEKHFKIGNNISFFGCLRNSYDNDVVSSSNMFLYRHCPYHDMYYNSTLRLDYPLPFNPFTCLLFQLPQFGSFCACPSCTFLFSFLEIKLNIPEDCKRCQRPQCEFEFVEGQGLKCYRHDHHAPPPPLSSPSPVSSPATGKAKKIGLYVGIPISIAVFALVVVIVLVLKGRKKDSGLEKKSRSGYSSSLRNRTSMESGGVYFGIPVFSFDDLREATNNFDHARKLGEGGFGTVYFGILGDGREVAVKRLFERNYRPVDSFTNEIQILTRLRHKNLVSLYGCTSRHSRDLLLVYEHIPNGTLSSHLHADQGNSHLLPWHLRMKIAVQTASALAYLHASDIIHRDVKTSNILLDNEFDAKVTDFGLSKLFPDDVTHISTAPRGTPGYVDPDYRLCHQLTTKSDVYSFGVVLVELISSLKPVDMNRNREDIKLANLAIRKIQMGTFFEMVDPSLGFESDEKLKVMIGSVAELAFQCLQEEKELRPSMGEVLEVLERIHSGRDEAGNLEGIVVHGATRASQSYAHPPLPNSLVIPQQALWKTN* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0309 652 SUPERFAMILY Protein kinase-like (PK-like) 314 608 IPR011009 -
Pvu3g0309 652 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0309 652 SMART serkin_6 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0309 652 Gene3D Transferase(Phosphotransferase) domain 1 409 615 - -
Pvu3g0309 652 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Pvu3g0309 652 Gene3D Phosphorylase Kinase; domain 1 306 408 - -
Pvu3g0309 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 615 - -
Pvu3g0309 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Pvu3g0309 652 CDD STKc_IRAK 338 607 - -
Pvu3g0309 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 615 IPR044652 -
Pvu3g0309 652 Pfam Protein kinase domain 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0309 Pvu-Chr3 2846765 2850688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0309 257 609 Receptor kinase-like Gene Family AT1G25390 54.237 4.29e-127 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu3g0309 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0309 - - var:108334729 889.797