Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g0305 | ATGGCTTCACCATTCCTCTTCCTTCTATTGCTTCACCTCTCTCTCCTCTCTCTCCTCTCTCACTCCACCAACCCTGACTTCCACCCTCTAATGTCCTTCAAAGCCTCTTCCGACCCTTCCGACACACTCTCCCAGTGGAACTCCACAACCTCAAACCCCTGCACCTGGTACGGTGTCTCTTGTCTTCGCAACCGTGTCTCTCGCCTTGTCCTCGAAGACCTTAACCTCACCGGCTCCATCCACCCCTTAACCTCCCTCACCCAACTTCGCATCCTCAGCCTAAAACGCAACCGTTTCAACGGCCCCGTCACCTCTCTCGCCAACCTCACCACCCTCCGCCTTCTCTTTCTCTCCCACAACAACTTCTCCGGCCACTTCCCCGCCGCCCTCACCTCCCTCTACCGCCTCAATCTCTCTCACAACAGCCTCTCCGGCGAAATTCCCGCCACGCTCAGCCGCTGGACCCACCTCCTCACCCTCCAGCTCGACTCCAACCGCCTCCAGGGCCGCATTCCCAGCAACATCAACCTCTCTCACCTCCATGACTTTAACGTCTCAAACAACCTCCTATCGGGTCAAATACCCGAATCGCTCTCGGCTTTCCCTGGATCCGCGTTCTCTAACAACCCCTCCCTCTGCGGAGCTCCCTTGCGAGAATGCAAAGCCAAAAGCAAAAACAAAAGCAAAAGCAAAGGAGAAGCAGTGATCCCGGCCCTGGCTTCCCCGTTGAAGCCAAGAAGCGACAGTGATTCCGGCAGGCCCCGGCGGCGGGAGAGGATAATGGGGGTGTTGGTCTTGATCGGTATTGTGGTGGGGGACGTGGTGGTCCTGGGTCTGGTGTCGCTGCTTCTGTACTGCTATTTCTGGAGGAACTACTCAGCTGCTGCAGAGTTGAGGAAGGAGGGAAAAGAGAGGAGGAGGAGTTGGAAGATGGTGGATGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGCTGCGTGCGTCGGCGGAGATGTTGGGGAAGGGTGCGTTTGGGAGTGCCTACAAAGCGGTGCTTGATGACGGAACCGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGCGTCGGAGGGAAGAGAGAGTTCCAGCAACGAATGGAAGTGCTCGGAAGGTTGAGACACTGTAACGTCGTTAGTTTGAGAGCTTACTGTTTCACCAAAGATGACAAGTTTCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCTTTCCTTCTCCACGGTAATCGAGGCCCAGGAAGGACCCCACTGGAGTGGACAATGAGGTTGAAGATTGCAGCTGGAGCGGCACGTGGCGTGGCATTCATTCACAAACATAAACTCACCCACGGTAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAATCCGCGAGTCGCGGATTTCGGTCTCTCCATCTTCGCCACCGCCTCCACTTTCAGATCCAACGGCTACCTCGCGCCAGAGGTATCGGACGGTCGCAAGCAGACCCAGATGTCTGACGTGTACTCCTTTGGCGTGCTATTGATAGAGATGCTGACGGGGAAGTGCCCTTCCGCCGTGGGCGGCGGACACGAGGCGGCGGTGGACCTTCCCAGGTGGGTCCGGTCGGTGGTGAGGGAGGAGTGGACGGCGGAGGTGTTCGATCTAGAATTGATGAGCTATAAGGACAATGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATAGCGTGCACTGCGACCGAACCTCATCAACGGCCCACGATGAGCCACGTGGTGAAGATGATCGAGGAGTTGCGTGGGGTCCAGATGTCGCCGTGTGATGAAGGGTTGGACTCGCTCTCTGAGTCACTCTCCGTGCCTGAAGCAAGGGCTACTCAATGA | 1884 | 0.5637 | MASPFLFLLLLHLSLLSLLSHSTNPDFHPLMSFKASSDPSDTLSQWNSTTSNPCTWYGVSCLRNRVSRLVLEDLNLTGSIHPLTSLTQLRILSLKRNRFNGPVTSLANLTTLRLLFLSHNNFSGHFPAALTSLYRLNLSHNSLSGEIPATLSRWTHLLTLQLDSNRLQGRIPSNINLSHLHDFNVSNNLLSGQIPESLSAFPGSAFSNNPSLCGAPLRECKAKSKNKSKSKGEAVIPALASPLKPRSDSDSGRPRRRERIMGVLVLIGIVVGDVVVLGLVSLLLYCYFWRNYSAAAELRKEGKERRRSWKMVDDGMVFLEGVRRFELEELLRASAEMLGKGAFGSAYKAVLDDGTVVAVKRLKEVSVGGKREFQQRMEVLGRLRHCNVVSLRAYCFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLEWTMRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNPRVADFGLSIFATASTFRSNGYLAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSAVGGGHEAAVDLPRWVRSVVREEWTAEVFDLELMSYKDNEEEMVALLQIAIACTATEPHQRPTMSHVVKMIEELRGVQMSPCDEGLDSLSESLSVPEARATQ* | 628 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g0305 | 627 | Pfam | Protein kinase domain | 336 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu3g0305 | 627 | Gene3D | Ribonuclease Inhibitor | 28 | 131 | IPR032675 | - | |
Pvu3g0305 | 627 | PANTHER | - | 21 | 615 | - | - | |
Pvu3g0305 | 627 | ProSiteProfiles | Protein kinase domain profile. | 332 | 599 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu3g0305 | 627 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 21 | 615 | - | - | |
Pvu3g0305 | 627 | Pfam | Leucine rich repeat N-terminal domain | 24 | 61 | IPR013210 | - | |
Pvu3g0305 | 627 | SUPERFAMILY | Protein kinase-like (PK-like) | 336 | 596 | IPR011009 | - | |
Pvu3g0305 | 627 | ProSitePatterns | Protein kinases ATP-binding region signature. | 338 | 360 | IPR017441 | GO:0005524 | |
Pvu3g0305 | 627 | SUPERFAMILY | L domain-like | 32 | 218 | - | - | |
Pvu3g0305 | 627 | Gene3D | Phosphorylase Kinase; domain 1 | 298 | 407 | - | - | |
Pvu3g0305 | 627 | Gene3D | Transferase(Phosphotransferase) domain 1 | 408 | 610 | - | - | |
Pvu3g0305 | 627 | Gene3D | Ribonuclease Inhibitor | 132 | 220 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g0305 | Pvu-Chr3 | 2822255 | 2826460 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g0305 | 26 | 622 | Receptor kinase-like Gene Family | AT1G68400 | 58.399 | 0.0 | 663 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Pvu3g0305 | Pkinase | 9.7e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g0305 | - | - | gmx:100810749 | 790.801 |