Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0305 ATGGCTTCACCATTCCTCTTCCTTCTATTGCTTCACCTCTCTCTCCTCTCTCTCCTCTCTCACTCCACCAACCCTGACTTCCACCCTCTAATGTCCTTCAAAGCCTCTTCCGACCCTTCCGACACACTCTCCCAGTGGAACTCCACAACCTCAAACCCCTGCACCTGGTACGGTGTCTCTTGTCTTCGCAACCGTGTCTCTCGCCTTGTCCTCGAAGACCTTAACCTCACCGGCTCCATCCACCCCTTAACCTCCCTCACCCAACTTCGCATCCTCAGCCTAAAACGCAACCGTTTCAACGGCCCCGTCACCTCTCTCGCCAACCTCACCACCCTCCGCCTTCTCTTTCTCTCCCACAACAACTTCTCCGGCCACTTCCCCGCCGCCCTCACCTCCCTCTACCGCCTCAATCTCTCTCACAACAGCCTCTCCGGCGAAATTCCCGCCACGCTCAGCCGCTGGACCCACCTCCTCACCCTCCAGCTCGACTCCAACCGCCTCCAGGGCCGCATTCCCAGCAACATCAACCTCTCTCACCTCCATGACTTTAACGTCTCAAACAACCTCCTATCGGGTCAAATACCCGAATCGCTCTCGGCTTTCCCTGGATCCGCGTTCTCTAACAACCCCTCCCTCTGCGGAGCTCCCTTGCGAGAATGCAAAGCCAAAAGCAAAAACAAAAGCAAAAGCAAAGGAGAAGCAGTGATCCCGGCCCTGGCTTCCCCGTTGAAGCCAAGAAGCGACAGTGATTCCGGCAGGCCCCGGCGGCGGGAGAGGATAATGGGGGTGTTGGTCTTGATCGGTATTGTGGTGGGGGACGTGGTGGTCCTGGGTCTGGTGTCGCTGCTTCTGTACTGCTATTTCTGGAGGAACTACTCAGCTGCTGCAGAGTTGAGGAAGGAGGGAAAAGAGAGGAGGAGGAGTTGGAAGATGGTGGATGATGGAATGGTGTTTTTGGAAGGGGTGAGGAGGTTTGAGTTGGAGGAGCTGCTGCGTGCGTCGGCGGAGATGTTGGGGAAGGGTGCGTTTGGGAGTGCCTACAAAGCGGTGCTTGATGACGGAACCGTGGTGGCGGTGAAGAGGCTGAAGGAGGTTAGCGTCGGAGGGAAGAGAGAGTTCCAGCAACGAATGGAAGTGCTCGGAAGGTTGAGACACTGTAACGTCGTTAGTTTGAGAGCTTACTGTTTCACCAAAGATGACAAGTTTCTCGTCTCTGATTACATGTGCAACGCTAGCTTCTCTTTCCTTCTCCACGGTAATCGAGGCCCAGGAAGGACCCCACTGGAGTGGACAATGAGGTTGAAGATTGCAGCTGGAGCGGCACGTGGCGTGGCATTCATTCACAAACATAAACTCACCCACGGTAACATCAAAGCCACCAATGTTCTTATTGACGTGGCGGGCAATCCGCGAGTCGCGGATTTCGGTCTCTCCATCTTCGCCACCGCCTCCACTTTCAGATCCAACGGCTACCTCGCGCCAGAGGTATCGGACGGTCGCAAGCAGACCCAGATGTCTGACGTGTACTCCTTTGGCGTGCTATTGATAGAGATGCTGACGGGGAAGTGCCCTTCCGCCGTGGGCGGCGGACACGAGGCGGCGGTGGACCTTCCCAGGTGGGTCCGGTCGGTGGTGAGGGAGGAGTGGACGGCGGAGGTGTTCGATCTAGAATTGATGAGCTATAAGGACAATGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATAGCGTGCACTGCGACCGAACCTCATCAACGGCCCACGATGAGCCACGTGGTGAAGATGATCGAGGAGTTGCGTGGGGTCCAGATGTCGCCGTGTGATGAAGGGTTGGACTCGCTCTCTGAGTCACTCTCCGTGCCTGAAGCAAGGGCTACTCAATGA 1884 0.5637 MASPFLFLLLLHLSLLSLLSHSTNPDFHPLMSFKASSDPSDTLSQWNSTTSNPCTWYGVSCLRNRVSRLVLEDLNLTGSIHPLTSLTQLRILSLKRNRFNGPVTSLANLTTLRLLFLSHNNFSGHFPAALTSLYRLNLSHNSLSGEIPATLSRWTHLLTLQLDSNRLQGRIPSNINLSHLHDFNVSNNLLSGQIPESLSAFPGSAFSNNPSLCGAPLRECKAKSKNKSKSKGEAVIPALASPLKPRSDSDSGRPRRRERIMGVLVLIGIVVGDVVVLGLVSLLLYCYFWRNYSAAAELRKEGKERRRSWKMVDDGMVFLEGVRRFELEELLRASAEMLGKGAFGSAYKAVLDDGTVVAVKRLKEVSVGGKREFQQRMEVLGRLRHCNVVSLRAYCFTKDDKFLVSDYMCNASFSFLLHGNRGPGRTPLEWTMRLKIAAGAARGVAFIHKHKLTHGNIKATNVLIDVAGNPRVADFGLSIFATASTFRSNGYLAPEVSDGRKQTQMSDVYSFGVLLIEMLTGKCPSAVGGGHEAAVDLPRWVRSVVREEWTAEVFDLELMSYKDNEEEMVALLQIAIACTATEPHQRPTMSHVVKMIEELRGVQMSPCDEGLDSLSESLSVPEARATQ* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0305 627 Pfam Protein kinase domain 336 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0305 627 Gene3D Ribonuclease Inhibitor 28 131 IPR032675 -
Pvu3g0305 627 PANTHER - 21 615 - -
Pvu3g0305 627 ProSiteProfiles Protein kinase domain profile. 332 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0305 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 615 - -
Pvu3g0305 627 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Pvu3g0305 627 SUPERFAMILY Protein kinase-like (PK-like) 336 596 IPR011009 -
Pvu3g0305 627 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Pvu3g0305 627 SUPERFAMILY L domain-like 32 218 - -
Pvu3g0305 627 Gene3D Phosphorylase Kinase; domain 1 298 407 - -
Pvu3g0305 627 Gene3D Transferase(Phosphotransferase) domain 1 408 610 - -
Pvu3g0305 627 Gene3D Ribonuclease Inhibitor 132 220 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0305 Pvu-Chr3 2822255 2826460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0305 26 622 Receptor kinase-like Gene Family AT1G68400 58.399 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu3g0305 Pkinase 9.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0305 - - gmx:100810749 790.801