Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0303 ATGGCAGTGGAACCTGAAGTTGAGCATCCAAGGAAGGCCTATGGATGGGCTGCTAGGGATACATCTGGTGTTCTCTCCCCATTTTTGTTCTCCAGAAGAAAAACAGGTGAGAAAGATGTGACATTCAAGGTGTTGTACTGTGGAATATGTCACTCAGACCTTCACAAATTGAAGAATGAATGGAGTGATTCCATTTATCCACTTGTTCCTGGGCGTGAGATTGTTGGAGAAGTGACAGAGGTGGGAAGCAAAGTAAAAAAGTTTAAGGTTGGAGAGAAGGTGGCTGTGGGATGCTTGGTTGGGTCTTGTCACTCATGCCAAAACTGTGTCAACAATCTTGAGAATTACTGTCAAAAATTGATTCACACATATGGTGCCAAGTATGTGGATGGGAGCATCACATATGGGGGATTCTCTGACTTCATGGTTGTAGATGAACACTTTGTTGTCAGCATTCCCAATGGCCTACCTCTTGATGCTGCTGCTCCTCTGCTATGTGCAGGGATCACAGTGTATGGCCCTTTGAGATATTTTGGCCTTGATAAACCTGGTTTGCACCTGGGAGTGGTTGGCCTTGGAGGACTGGGCCATCTGGCTGTCAAGTTTGCAAAAGCCCTTGGCTTGAAGGTCACTGTCATTAGTACCTCTCCTAATAAGAAAGAAGAAGCCATTCAACATCTTGGAGCAGATTCCTTTGTGGTCAGCAGAGACCAAGATCAAATGAAGGCTGCAATATGCACCTTGGATGGTATAATTGACACTGTTTTTGCAGTTCATCCTCTAATGCCATTGATTGATCTATTGAAGTCTCATGGGAAACTGGTGGCAGTTGGGGCACCAGAGAAGCCTCTGGAGTTGCTACTCCCCACTTTAATTTTGGGGAGAAAAAGTGTAGCAGGTAGTTACTTTGGAGGACTGAAGGAGACACAAGAAATGATTGATTTTGCTGCTGAACACAATATTAGACCAGAAATTGAAGTAATTCCAATGGATTATGTGAACACAGCAATGCAGAGACTAGTGAAAGCTGATGTTAAGTATCGATTTGTGATTGACATTGGGAACACATTGAAACCCTAG 1080 0.4389 MAVEPEVEHPRKAYGWAARDTSGVLSPFLFSRRKTGEKDVTFKVLYCGICHSDLHKLKNEWSDSIYPLVPGREIVGEVTEVGSKVKKFKVGEKVAVGCLVGSCHSCQNCVNNLENYCQKLIHTYGAKYVDGSITYGGFSDFMVVDEHFVVSIPNGLPLDAAAPLLCAGITVYGPLRYFGLDKPGLHLGVVGLGGLGHLAVKFAKALGLKVTVISTSPNKKEEAIQHLGADSFVVSRDQDQMKAAICTLDGIIDTVFAVHPLMPLIDLLKSHGKLVAVGAPEKPLELLLPTLILGRKSVAGSYFGGLKETQEMIDFAAEHNIRPEIEVIPMDYVNTAMQRLVKADVKYRFVIDIGNTLKP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0303 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Pvu3g0303 359 Gene3D - 167 323 - -
Pvu3g0303 359 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
Pvu3g0303 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Pvu3g0303 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 358 - -
Pvu3g0303 359 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Pvu3g0303 359 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Pvu3g0303 359 Gene3D - 16 353 - -
Pvu3g0303 359 CDD CAD1 15 352 - -
Pvu3g0303 359 PANTHER ALDEHYDE REDUCTASE 1 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0303 Pvu-Chr3 2782812 2792953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0303 11 359 Monolignol Biosynthesis Gene Families AT4G37990 69.628 4.50e-164 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0303 - K23232 gmx:100812491 642.884