Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0278 ATGGCCTCAAAATATGTATATTGTAGCATTAAGGTGACTCTGATGGTAGTTTTTCTGACAACCCAGGTTGTGTTACCTGATGATGATACACCAATGCCTTCTGATAAGACAGAATTAGGGTCATGGTTTCAAAGTAATGTAGGGACTTTAAGGAAAAGAAAGGGTAGCTTGGACCCTAAATTAGTGGCTGCTGAAGAAGGTGCCAAGGTTGTGAAGGTAATGCAAGATGGGAGTGGGGAATACAAGACCATAAGTGATGCCCTTAGAAGCATACCTTCAGGGAACACCATGCGTGTGATTTTGTATATTGGACCAGGAAATTACCATGAGAAAATCACCGTTGAGAAGACAAAACCTTTCGTGACCTTCTATGGGAAACCAGGGAACATGCCAAACTTGACCTATGACGGCACGGCAAGACAATATGGCACTGTTGATAGTGCCACATTGATTGTTTTATCAGACTACTTTGTGGCTGCCAACATTATAATATCGAACTCTGCTCCAAGACCTGATGAAAACAGTGTAGGAGGTCAAGCAGTTGCATTACGAATTTCTGGAGACAAAGCTACATTTTATAACTGCGAGCTATATGGGTACCAAGACACATTGTTGGATGATGCAAATAGACATTTTTTCAAAGACTGTTTGATTCAAGGATATGTTGATTATATTTTTGGAAGTGGAAAGTCACTATATGTGAATTGCGAAATAAGAACTCTTGGCGATGAAGGGTTTACTTTTATAACAGCACAAGCAAGAAAAAATAAGCAAGAGGACAATGGGTTCTCCTTTGTACATTGTGAACTTACTGGAACTGGATCTGATACTTACTTGGGAAGAGCCTGGTTTGGTTATTCCACAGTCATCTTTGCTTACTGCAACATGGCCAACATTTTCAACAAACAAGCCTGGAGTGACAACAATCACCCTGAATTCGACAAAACTCTTTATTTTGGGGAGTATAAGAACAGAGGACCTGGTTCAGATGTGAGAGGGCGTTCTCCATTGGCAAAGCAACTGAGTGAGTCAGAGGTTAAGCCATACCTAGGTATTGGTATGATAGAAGGGTCAAAATGGATACTTCCTCCTCCAACTCCCAAACTCTAA 1110 0.409 MASKYVYCSIKVTLMVVFLTTQVVLPDDDTPMPSDKTELGSWFQSNVGTLRKRKGSLDPKLVAAEEGAKVVKVMQDGSGEYKTISDALRSIPSGNTMRVILYIGPGNYHEKITVEKTKPFVTFYGKPGNMPNLTYDGTARQYGTVDSATLIVLSDYFVAANIIISNSAPRPDENSVGGQAVALRISGDKATFYNCELYGYQDTLLDDANRHFFKDCLIQGYVDYIFGSGKSLYVNCEIRTLGDEGFTFITAQARKNKQEDNGFSFVHCELTGTGSDTYLGRAWFGYSTVIFAYCNMANIFNKQAWSDNNHPEFDKTLYFGEYKNRGPGSDVRGRSPLAKQLSESEVKPYLGIGMIEGSKWILPPPTPKL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0278 369 SUPERFAMILY Pectin lyase-like 68 364 IPR011050 -
Pvu3g0278 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Pvu3g0278 369 Gene3D - 66 364 IPR012334 -
Pvu3g0278 369 Pfam Pectinesterase 71 335 IPR000070 GO:0030599|GO:0042545
Pvu3g0278 369 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0278 Pvu-Chr3 2437984 2440448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0278 5 365 Carbohydrate Esterase AT1G69940 49.861 1.27e-138 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0278 K01051 - gmx:100816036 547.354