Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0272 ATGAAACTTTCCTTCTCTGTCCCTTCATCGAAACCCCAATCGAAGCCCAAACCGGTCAATACCTTCGACGACACTTCTGGAACCCAAAACGACGGTGGCGGATCCAAACACCTCATCACTGAATTCGATCCTTCCAAACCCGCTCCCTCCCTCGCCCCCAAAACCCAAATTCCGCCAATCCAAAACCAATGGAAACCCTTCAAGAAGATGAAGAACCTTCACCTCCCCACCGCCGACCCCGAATCCGAAGCCCTCACATTCGAACTCCATGCTGCTGACGACCAACCCGACTCCGACGTCTCCTATGGCCTCAACCTCCGCACCGACAAGAAAAGTGAGCAAAACAATGGTACCGCACTTCCGCCGCCGTCGCGCCGCGTTCCGGCGGAGAGCACGATGCTGCAGAAGCTGAAGGACGACCTGCTGAGGCTACCGGAGGACAAGGGGTTCGACGAATTTAAGGATGTCCCCGTCGAGGGTTTTGGCGCTGCGCTGCTAGCTGGGTACGGGTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTTAAGGTTGTGGAGATCAAAAGGCGAACTGCTAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCTCTGGTTCGGAGCAACAATGACAAGGACAAGGAGAAGAATGAGAAGAAGGATAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCTGAAGGGTAGTGTTGTGTCTAGGATTGAGGATTATTATCTTGTTTTGGAGCTATCCAGGAGTGGAGAGAAGGTGAAGGTGAAGGTGGGCGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGATGTCTGAGGAAATTGAAGGAGTTGAAGATTCAGCGTGAGGATAGAGGGCCGAAGAGGAAGCAAGACAGGAATGAGGTGGAGGAGAATAGAGTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGGTCGCAGGGATGTGATTGAGAAGAGAACGGATGGTGGTAGGAGAGAGGAGAGGAGAGTGGTGGATCATAGGAAGGTTTCTTGGCTTACTAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGACTATTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAAAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGAATTTCTGGAGACTGCTATTCCGAAACGTGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGGGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAGCTTGAACAAATTGCGGAGTATTTAGGGGACCCAAGCTTGTTGGGACATTGA 1407 0.516 MKLSFSVPSSKPQSKPKPVNTFDDTSGTQNDGGGSKHLITEFDPSKPAPSLAPKTQIPPIQNQWKPFKKMKNLHLPTADPESEALTFELHAADDQPDSDVSYGLNLRTDKKSEQNNGTALPPPSRRVPAESTMLQKLKDDLLRLPEDKGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVRSNNDKDKEKNEKKDKVVRIVGGRDAGLKGSVVSRIEDYYLVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKELKIQREDRGPKRKQDRNEVEENRVDVSRREERKGVGRRDVIEKRTDGGRREERRVVDHRKVSWLTSHIRVRVISRDLKGGLLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQEFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDREMAIVRDADTHELLNVKLEQIAEYLGDPSLLGH* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0272 468 PANTHER G PATCH AND KOW-CONTAINING 1 466 IPR045166 GO:0000398
Pvu3g0272 468 MobiDBLite consensus disorder prediction 1 35 - -
Pvu3g0272 468 MobiDBLite consensus disorder prediction 101 121 - -
Pvu3g0272 468 Pfam G-patch domain 145 201 IPR026822 -
Pvu3g0272 468 SMART G-patch_5 156 202 IPR000467 GO:0003676
Pvu3g0272 468 ProSiteProfiles G-patch domain profile. 158 204 IPR000467 GO:0003676
Pvu3g0272 468 MobiDBLite consensus disorder prediction 292 314 - -
Pvu3g0272 468 Gene3D - 353 407 - -
Pvu3g0272 468 MobiDBLite consensus disorder prediction 1 130 - -
Pvu3g0272 468 SMART kow_9 407 434 IPR005824 -
Pvu3g0272 468 SMART kow_9 221 248 IPR005824 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0272 Pvu-Chr3 2386229 2387765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0272 344 441 C2H2 Transcription Factor Family AT1G55460 32.653 1.86e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0272 K13101 - gmx:100784983 664.455