Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0259 ATGGCGCCGAAGAAGCCAAGAAGCACGTCGAGGAACCCTGAACTCATCAGGGGTATTGGGAAGTACTCGAGGTCCCAGATGTACCACAAGAGGGGCATCTGGGCCATCAAGGCAAAAAATGGCGGCGCTTTCCCTCGCCACGCCCCCACGCCCAAACCCGACGCCCCGGCCCAGAAGCCTCCCAAGTTTTACCCCGCCGACGATGTCAAGAAGCCTCTCGTCAACAAGCATAAGCCCAAGCCCGCTAAACTCAGGGCTAGCGTTACTCCAGGAACAGTGTTGATCCTACTTGCTGGGAGGTTCAAGGGAAAGAGGGTTGTTTTTCTGAAGCAGCTTCCATCTGGTTTGCTTCTTGTAACAGGTCCCTTTAAGATCAACGGTGTTCCTCTAAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTGGACATCTCTGGTGTTAATGTGGATAGATTTGATGACAAGTACTTTGCCAAGGATGCCAAGAAGAAGAAAACTAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAATACTCTTCCCCAAGAGAAGAAAGATGACCAGAAAACCGTGGATTCTGCTTTGTTAAAGGCAATTGAGAGTGTTCAAGACCTGAAGTCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAACCCCATGAACTAGTCTTCTAG 699 0.4921 MAPKKPRSTSRNPELIRGIGKYSRSQMYHKRGIWAIKAKNGGAFPRHAPTPKPDAPAQKPPKFYPADDVKKPLVNKHKPKPAKLRASVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDRFDDKYFAKDAKKKKTKGEGEFFEAEKEEKNTLPQEKKDDQKTVDSALLKAIESVQDLKSYLGARFSLKAGMKPHELVF* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0259 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pvu3g0259 232 MobiDBLite consensus disorder prediction 40 83 - -
Pvu3g0259 232 Pfam Ribosomal protein L6e 125 232 IPR000915 GO:0003735|GO:0005840|GO:0006412
Pvu3g0259 232 Gene3D - 86 170 IPR014722 -
Pvu3g0259 232 Pfam Ribosomal protein L6, N-terminal domain 4 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Pvu3g0259 232 PANTHER 60S RIBOSOMAL PROTEIN L6 1 232 - -
Pvu3g0259 232 CDD KOW_RPL6 80 232 IPR041997 -
Pvu3g0259 232 SUPERFAMILY Translation proteins SH3-like domain 86 172 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0259 Pvu-Chr3 2284422 2286554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0259 3 232 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 79.310 1.10e-118 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0259 K02934 - gmx:100784101 384.03