Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0254 ATGATGCCCCCTCAGCAAGAAAACGCTGTTACACCTGACATTCCGGCCGTCCCCAACCTCCCGGAAAACAGCTCCGTCCACGCCGAACCATCTTCCTCCGCCGCCAATCACATTCACAACAACAATCATTCTCACCAACACCCACAGTCAAATATTCCACCACCAAGATTTTCTGTTCTTCGTCAATCCCTTCGCCCCGTTACCCTCAAATTTGAGGATGTTTCCTACAGCATAACTTTCGGAAGGGAGAAGAATGGTTGTGTATCTTCTCAAAAACCAAAGCACACAAGAACAGTGTTGAATGGTGTGAGTGGAATGGTGGGGCCAGGGGAGGTAATGGCAATGTTGGGTCCCTCAGGGAGTGGCAAGACCACTTTACTCACTGCCCTCGCCGGCCGTCTCGCCGGAAAACTCTCCGGCGCCGTAACGTACAACAACCACCCTTTCTCCAGCTCCATGAGGCGCAACATAGGGTTTGTGTCCCAAGACGATGTCTTGTACCCTCACCTCACTGTGATCGAGACTCTAGGTTACGCCGCCATGTTGAAACTTCCAAAGAGTTTGACAAGGGAAGAGAAAATGGAGCAGGCTGAAATGATTATTGGGGAACTGGGGTTGTCGCAGTGCCGAAACAGCCGCGTTGGTGGCGGCGCCGCCTTTTTTCGGGGGATTTCAGGCGGCGAGCGAAAGCGGGTGAGCATAGGACAGGAGATGTTGGTAAACCCAAGTTTGTTGTTGCTTGATGAGCCGACATCGGGGTTGGACTCCACCACTGCCCAACGCATCGTGGCAATGCTTCATGGTCTTGCCCGAAGTGGTCGGACGGTGGTGACCACCATTCACCAACCTTCGAGCAGGTTGTTTTGGATGTTTGATAAGGTGTTGCTGCTGTCGGAGGGGTGCCCGATTTTCACCGGGCAAGCATCTCAGGCCATGAATTATCTTGACTCCATTGGGTTTGTGCCCACTTTCAGTTTCATCAACCCAGCTGATTTTCTACTTGACCTTGCTAATGGTGTAGTTGTTGATGTCAAAGAAGATGAACATTTAGATCAGCATGAGGATCAAGCTTCAATCAAACAATTCCTAGTTTCATCGTATAAGAAGAATGTATATCCTCTTCTAAAACAAGAGATTCAACAAAATCACAGAGAACTAGCCTTTTTTGCTTCAAGAACATTTGGAAGTTCTGAGAACCAATGGACCACTAGCTGGTGGGAACAATTCATGGTTCTGCTTAAGAGAGGTTTGAAAGAGAGGAGACATGAATCTTACTCTAGCCTAAGAATTTTCCAAGTCTTGTCTGTCTCAATCCTCTCAGGACTTCTATGGTGGCATTCTGATCCCTCACAGATACAAGACCAGGTAGGTCTGCTATTCTTCTTCTCCATCTTCTGGGGTTTTTTCCCTCTCTTCAATGCCATATTTGCTTTTCCTCTTGACCGACCAATGTTGATAAAAGAAAGATCATCAGGAATGTACCATTTATCCTCATACTATGTTGCCAGGACAGTTGGGGACTTACCAATGGAGCTTGTGCTTCCTACAATCTTTGTAACAATATCTTATTGGATGGAAGGTCTCAAGCCTTCCCTAGTTACGTTTGTGTTTACTCTCTTGATCATGCTTTTCAATGTGCTAGTTTCTCAAGGAATAGGCCTTGCACTTGGGGCCATTCTGATTGATGTCAAACAAGCCACAACCTTAGCCTCAGTGACCATGCTGGTGTTTCTTTTAGCTGGGGGTTACTACATTCAAAAAATTCCATTCTTTATATCTTGGTTGAAGTACATCTCTTTCAGTCACTATTGCTATAAGCTTCTTGCAGGAGTGCAATACTCAGTAAATGAAGTCTATGAGTGTGGACATGGCTTACATTGTAAGATCAGAGACTTTCCTGCCATAAAGTGTCTAGGGCTTGATAATTTGTGGAAAGATGTGGTTGTGTTGACTATAATGTTGATTGGATATAGAGTTGTGGCATATCTAGCTCTGAGGAAGGGGCTATATCATTGA 2016 0.4603 MMPPQQENAVTPDIPAVPNLPENSSVHAEPSSSAANHIHNNNHSHQHPQSNIPPPRFSVLRQSLRPVTLKFEDVSYSITFGREKNGCVSSQKPKHTRTVLNGVSGMVGPGEVMAMLGPSGSGKTTLLTALAGRLAGKLSGAVTYNNHPFSSSMRRNIGFVSQDDVLYPHLTVIETLGYAAMLKLPKSLTREEKMEQAEMIIGELGLSQCRNSRVGGGAAFFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVAMLHGLARSGRTVVTTIHQPSSRLFWMFDKVLLLSEGCPIFTGQASQAMNYLDSIGFVPTFSFINPADFLLDLANGVVVDVKEDEHLDQHEDQASIKQFLVSSYKKNVYPLLKQEIQQNHRELAFFASRTFGSSENQWTTSWWEQFMVLLKRGLKERRHESYSSLRIFQVLSVSILSGLLWWHSDPSQIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLIKERSSGMYHLSSYYVARTVGDLPMELVLPTIFVTISYWMEGLKPSLVTFVFTLLIMLFNVLVSQGIGLALGAILIDVKQATTLASVTMLVFLLAGGYYIQKIPFFISWLKYISFSHYCYKLLAGVQYSVNEVYECGHGLHCKIRDFPAIKCLGLDNLWKDVVVLTIMLIGYRVVAYLALRKGLYH* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0254 671 Gene3D - 69 318 IPR027417 -
Pvu3g0254 671 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524
Pvu3g0254 671 MobiDBLite consensus disorder prediction 1 57 - -
Pvu3g0254 671 Pfam ABC-2 type transporter 281 345 IPR043926 GO:0140359
Pvu3g0254 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 318 IPR027417 -
Pvu3g0254 671 SMART AAA_5 109 301 IPR003593 -
Pvu3g0254 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 38 668 - -
Pvu3g0254 671 MobiDBLite consensus disorder prediction 24 57 - -
Pvu3g0254 671 Pfam ABC transporter 100 252 IPR003439 GO:0005524
Pvu3g0254 671 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 668 - -
Pvu3g0254 671 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 324 IPR003439 GO:0005524
Pvu3g0254 671 Pfam ABC-2 type transporter 407 612 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0254 Pvu-Chr3 2215724 2220553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0254 99 300 Calmodulin-binding Proteins AT2G36910 29.717 5.84e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0254 K05681 - gmx:100810165 1095.49