Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0248 ATGAAGGGTGGGAAGAGAAGGAAGTTGCATCTTAGCAAAATCTATTCATTTGCATGTGGTAAACAATCTCTCAAGGAGGATCATTCGCAGATAGGAGGAAGAGGGTATTCCAGGGTGGTGTTTTGCAATGAACCAGAGAGCTTTGACTCTGGGATAAGGAATTATGCTGATAATGCTGTGAGCTCTACAAAGTATAATCTTGTTACTTTCTTGCCTAAGTCACTCTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTAACTGGCATCTTGGCCTTCACAAAGCTTGCTCCTTATACCGCTGTCAGTGCTATCCTTCCTCTGATTATTATTGTTGGAGCAACTATGATCAAAGAGGGCATTGAAGATTGGCGAAGGAAACAGCAGGACATGGAGGTGAATAATAGAAGAGTTAAAGTGCATACAGGGCAAGGAAGTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATACTGAAGGACGAATTCTTTCCTGCAGACCTCCTACTGCTTTCTTCCAGTTATGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACACGAGGACTTTGAATTAGGTGATTTTAAAGCAACAGTAAAATGTGAAGACCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATGAAGAACAACAGTATCCTCTTTCTCCTCAGCAACTTCTTCTGAGAGACTCTAAACTTCGTAACACAGACTATATATATGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTCATTCAGAATTCCACTGATGCCCCTTCAAAGAGAACAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGTATTGTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTTCAACTAAAGATGACTTGGACAATGGAGTAATGAAAAGATGGTACCTAAGACCAGATGACTCTACAATTTTCTTTGATCCTAAAAGAGCACCAGCTGCTGCTATACTTCACTGTTTGACAGCCTTAATGTTATATGGTTTCTTCATTCCCATCTCTTTGTATGTTTCAATAGAAATTGTCAAAGTCCTTCAGAGCATCTTCATAAATCAAGATATCCATATGTACTATGAAGATGCAGACAAACCAGCCCACGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAATTCAATGGAGTTCATCAAATGTTCCATTGCTGGGGTAGCTTATGGCCGTTGTGTTACAGAGGTTGAGAAGGCAATGGATAGTGGTTCTCCTTTGATTGATGATTCAAGGGGCTCTCCTGCCAGAAAGGCTCCCATCAAAGGATTTAACTTTACAGATGAAAGGATAATGAATGGAAAATGGTTTAATGAGCCTAATGCAAATGTTATTAAGAATTTTTTTCAGTTATTGGCAATCTGCCATACAGCCCTTCCAGAAGTTGATGAAGATACAGGAAATGTTTCATATGAAACTGAATCTCCAGATGAATCAGCATTTGTGATTGCAGCGAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATCTATGAATTGGATCCAGTTTCTGGTGAAAAAATTGAAAGGACATACAAGCTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATTGTGAAAGATGAAGAAGGGAGAATTTTGTTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTTCCAAGGATGGGAGGGAGTTTGAGGAGAAAACCTTGGAACATGTGCATGAATATGCTGATGCAGGTCTAAGGACTCTAATTCTGGCATATCGTGAACTTGATGAAAACCAATACAAGGAGTTTGATAATAAATTTTCTCAAGCAAAAAGTTCAGTTAGTGAAGATCGGGAAACACAGATTGAAGAAATATCAGATAAGATAGAAAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTACTTAGACAAGGAATGAAACAAATTGTAATCCAATTGGAAACTCCAGAAATTCAAGCATTGGAGAAGGCCGGAGACAAGGTGGCTATTGCTAAGGCTTGTAGAGAAAATGTCCGCCATCAAATATCTGAAGCTTCTCAGCAGCTTACTGCCTCCAAAGGAACCTCTCAGCAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCTTATGCTCTAGAGGATAATATGAAGAACATGTTTCTGGACCTTGCAGTTCGTTGTGCATCTGTTATCTGCTGCCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGATTGGTAAAATCTGGTACTGGTAAAACTACATTAGCTATTGGTGATGGAGCTAATGATGTGGGAATGCTTCAAGAAGCAGATATAGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGGTTACTTCTTGTACATGGACATTGGTGTTACCGAAGGATCTCATCAATGATATGCTATTTCTTCTACAAAAACATCACATTTGGCTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGGCAACCTGCATACAATGACTGGTTTTTGTCAGTCTATAATGTCTTCTTTTCGTCACTTCCTGTGATTGCTCTTGGGGTCTTTGACCAGGATGTGTCTGCTCGGTACTGTCTGAGGTTTCCTATGTTATATCAAGAAGGCGTGCAAAATCTTCTCTTTAGCTGGCGGCGAATTTTCAGCTGGATGCTTAATGGCTTTGTTAGTGCCATATTAATTTTCTTTTTCTGCACAAAGGCAATGGAGATTCAAGCCTTTGATGAGAAGGGAAGAACTGCTGGCAGGGATATACTTGGAGCAACAATGTATACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTGCTATAAATTACTTCACCTTGATTCAACATATTTTCATCTGGGGTTCCATTGCTATCTGGTACCTTTTCCTCCTGGCATATGGAGCAATGTCTCCCAGCATTTCAGGAAATGCTTACAAAGTCTTCGTTGAAACTCTTGCTCCTTCGCCTTCCTTTTGGATTGTGACATTGCTTGTTGTGATCTCAACACTTATCCCATACTTCTCTTACTCAGCAATACAAATGAGGTTCTTTCCAATGTATCACGAAATGGTACAATGGATAAGGCATGATGGAAAGACAAATGATCCTGAATTCATGGCCATGTTGCGGCAAGGATCATTGCGGCCAACAACTGTCGGTTCAACCGCTCGCTTAGCGGCAAAGGATAATGACTTCAAAGACAGTTCAACTAACCATAGATAA 3567 0.4003 MKGGKRRKLHLSKIYSFACGKQSLKEDHSQIGGRGYSRVVFCNEPESFDSGIRNYADNAVSSTKYNLVTFLPKSLFEQFRRVANFYFLVTGILAFTKLAPYTAVSAILPLIIIVGATMIKEGIEDWRRKQQDMEVNNRRVKVHTGQGSFEYTEWKNLKVGHIVKILKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVTSSLHEDFELGDFKATVKCEDPNANLYSFVGSMEYEEQQYPLSPQQLLLRDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRTKVEKKMDRVIYFMFCIVFLMAFVGSIFFGISTKDDLDNGVMKRWYLRPDDSTIFFDPKRAPAAAILHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRCVTEVEKAMDSGSPLIDDSRGSPARKAPIKGFNFTDERIMNGKWFNEPNANVIKNFFQLLAICHTALPEVDEDTGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSIYELDPVSGEKIERTYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLSKDGREFEEKTLEHVHEYADAGLRTLILAYRELDENQYKEFDNKFSQAKSSVSEDRETQIEEISDKIERNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIVIQLETPEIQALEKAGDKVAIAKACRENVRHQISEASQQLTASKGTSQQAFALIIDGKSLAYALEDNMKNMFLDLAVRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNVFFSSLPVIALGVFDQDVSARYCLRFPMLYQEGVQNLLFSWRRIFSWMLNGFVSAILIFFFCTKAMEIQAFDEKGRTAGRDILGATMYTCVVWVVNLQMAVAINYFTLIQHIFIWGSIAIWYLFLLAYGAMSPSISGNAYKVFVETLAPSPSFWIVTLLVVISTLIPYFSYSAIQMRFFPMYHEMVQWIRHDGKTNDPEFMAMLRQGSLRPTTVGSTARLAAKDNDFKDSSTNHR* 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0248 1188 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Pvu3g0248 1188 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1133 IPR023298 -
Pvu3g0248 1188 Pfam Phospholipid-translocating P-type ATPase C-terminal 883 1133 IPR032630 -
Pvu3g0248 1188 Gene3D - 116 286 - -
Pvu3g0248 1188 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Pvu3g0248 1188 Pfam Cation transport ATPase (P-type) 522 617 - -
Pvu3g0248 1188 SFLD Haloacid Dehalogenase 406 906 - -
Pvu3g0248 1188 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1140 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu3g0248 1188 Gene3D - 540 689 IPR023299 GO:0000166
Pvu3g0248 1188 CDD P-type_ATPase_APLT_Dnf-like 57 1015 - -
Pvu3g0248 1188 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pvu3g0248 1188 Gene3D - 690 895 IPR023214 -
Pvu3g0248 1188 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1182 - -
Pvu3g0248 1188 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 827 937 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g0248 1188 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pvu3g0248 1188 PRINTS P-type cation-transporting ATPase superfamily signature 855 874 - -
Pvu3g0248 1188 SFLD p-type atpase 406 906 IPR044492 -
Pvu3g0248 1188 SUPERFAMILY Calcium ATPase, transduction domain A 142 283 IPR008250 -
Pvu3g0248 1188 SUPERFAMILY HAD-like 412 899 IPR036412 -
Pvu3g0248 1188 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 691 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0248 Pvu-Chr3 2121638 2129577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0248 1 1183 Primary Pumps ATPases AT1G68710 72.082 0.0 1864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0248 K01530 - gmx:100811892 2190.62