Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0246 ATGTCGGCAGCGTCGCCGTCGCCGGCGGCATCCACGGCTTCGCCACCGTCACAGACGCCATCCTCCTCCAACACTGGTCCCTCACCCTCCAACACCACCACTCCTCCTCCGCAACAAACCCCTTCTTCCACTTCTCCGCCACAACAACCTGCTTCTCCGCCGCCTTCTCCGCCATCTTCTCCGCCGTCATCGCCGCCCAGTTCTTCACCTCCCCCCGTGTCTGGAACAACCCCTCCTTCAGTACCTCCACCATCACCACCGCCATCTCCGCCGCCAGCTCCGGATGCACCGCCACCGGTGACACCGAGCTCTCCATCTCCACCGCCACCGGTGACACCGAGCTCTCCATCTCCACCGCCACCGGTGACACCGAGCTCTCCACCTCCACCCCCACCATCAGCACCAATTCCATCAAGAAGCCCTCCTTCACCGCCACCACCATCAAACCCTCCTAATAACACATCTCCACCACCGTTACCACCACCCCCACAACCATCACCATCAGCGCCACCACCTAACAACACCCCACCACCACCGCCGCGGGGAAATTCACCACCTCCTCCGGCCACCACGCCGCCACCAGCCTCGCCACCACGAAATTCACCGCCTGCTCCGGCTGCACCGCCCCCCAGTAACTCAACTAGGTCGCCGCCGCCGGTAAATTCGCCTCCACCAGCAGCGCATGCGCCGCCACCCAGGTCATCGGCGCCGCCAGCACCTGAACCCTCCAACCCTCCTTCTAGCATTAGTCCTCCTCCCACACCAAGTTCCTCACCACCTCCACCTTCAAATTCTACGCCAAGCTCATCACCTCCATCACCACCTTCACTTACTCCATTGGCCCCGCCACCGCCACCATCGCCCCCATCCCCGCCTCCCAATGCGACATCAGACTCAACCCCTGGTGGAGATGGAATTGGCACTGCTGGTGTAGTGGCTATTAGTGTGGTGGGTGGATTTCTGCTTCTTGGCTTCATCGGTGTTCTTATGTGGTGCATGAGGAGGCAAAAGAGAAAGATTCCTGTGAATGGTGGTTATGTTATGCCATCCACTCTGGCCTCATCTCCTGAATCAGATTCATCCTTTTTCAAGACACACTCCTCAGCTCCTCTTGTACAAAGTGGCTCTGGCAGTGATGTTGTGTACACACCATCTGATCCTGGTGGACTAGGCCACTCAAGATCATGGTTTTCATACGAAGAACTAATCAAGGCCACAAATGGTTTCTCAAGTCAAAATCTTTTGGGTGAGGGGGGATTTGGTTGTGTGTATAAAGGACAGCTTCCTGATGGAAGAGAGATAGCAGTGAAAGAACTGAAGATTGGTGGAGGTCAGGGAGAGAGAGAATTCAAAGCTGAAGTGGAAATTATCAGTCGTATACATCATCGCCATTTGGTTTCTTTAGTGGGATACTGCATTGAAGACAACAGAAGACTACTTGTCTATGACTTCGTTTCTAACGATACCCTTTACTTCCATCTACATGGGGAAAGCCAGCCTGTGCTAGAATGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCCCGAGGACTAGCTTATCTGCATGAAGACTGCAACCCTCGGATCATTCACAGGGATATCAAGTCTTCAAACATTCTTTTAGATTTCAATTATGAAGCTAAGGTCTCAGATTTTGGGCTAGCCAAATTAGCTCTTGATGCAAACACACATATTACCACCCGTGTCATGGGAACTTTTGGGTATGTTGCCCCTGAATATGCTTCAAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCTTTCGGAGTTGTGCTTTTGGAGCTAATTACTGGACGGAAGCCTGTAGATGTATCCCAACCTTTGGGAGATGAAAGCCTGGTTGAATGGGCTCGGCCTTTACTGAGTCAGGCAATCGATACTGAGGAATTCAATACTTTGGCAGATCCAAGGCTGGAAAAGAATTATATTGAGAGTGAATTGTATTGCATGATTGAGGTTGCTGCAGCTTGTGTGCGGCATTCAGCTTCAAAGAGACCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGGTTCTGATCTAACCAATGGAATGCAACTTGGGGAAAGTGAGGTGTTTGACTCTGCACAACAATCTGAAGAAATAAGATTATTTCGGAGGATGGCATTTGGTAGTCAAAATTACAGCACAGACTTCTTTAGCCGTGCTAGTATGAATCCATGA 2211 0.5179 MSAASPSPAASTASPPSQTPSSSNTGPSPSNTTTPPPQQTPSSTSPPQQPASPPPSPPSSPPSSPPSSSPPPVSGTTPPSVPPPSPPPSPPPAPDAPPPVTPSSPSPPPPVTPSSPSPPPPVTPSSPPPPPPSAPIPSRSPPSPPPPSNPPNNTSPPPLPPPPQPSPSAPPPNNTPPPPPRGNSPPPPATTPPPASPPRNSPPAPAAPPPSNSTRSPPPVNSPPPAAHAPPPRSSAPPAPEPSNPPSSISPPPTPSSSPPPPSNSTPSSSPPSPPSLTPLAPPPPPSPPSPPPNATSDSTPGGDGIGTAGVVAISVVGGFLLLGFIGVLMWCMRRQKRKIPVNGGYVMPSTLASSPESDSSFFKTHSSAPLVQSGSGSDVVYTPSDPGGLGHSRSWFSYEELIKATNGFSSQNLLGEGGFGCVYKGQLPDGREIAVKELKIGGGQGEREFKAEVEIISRIHHRHLVSLVGYCIEDNRRLLVYDFVSNDTLYFHLHGESQPVLEWANRVKIAAGAARGLAYLHEDCNPRIIHRDIKSSNILLDFNYEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDVSQPLGDESLVEWARPLLSQAIDTEEFNTLADPRLEKNYIESELYCMIEVAAACVRHSASKRPRMGQVVRAFDSLGGSDLTNGMQLGESEVFDSAQQSEEIRLFRRMAFGSQNYSTDFFSRASMNP* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0246 736 Pfam Protein tyrosine and serine/threonine kinase 412 681 IPR001245 GO:0004672|GO:0006468
Pvu3g0246 736 ProSiteProfiles Protein kinase domain profile. 409 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0246 736 Gene3D Phosphorylase Kinase; domain 1 389 484 - -
Pvu3g0246 736 CDD STKc_IRAK 415 685 - -
Pvu3g0246 736 ProSitePatterns Protein kinases ATP-binding region signature. 415 437 IPR017441 GO:0005524
Pvu3g0246 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Pvu3g0246 736 MobiDBLite consensus disorder prediction 1 304 - -
Pvu3g0246 736 Gene3D Transferase(Phosphotransferase) domain 1 485 695 - -
Pvu3g0246 736 PANTHER BNACNNG34790D PROTEIN 205 732 - -
Pvu3g0246 736 PRINTS Proline rich extensin signature 14 26 - -
Pvu3g0246 736 PRINTS Proline rich extensin signature 34 50 - -
Pvu3g0246 736 PRINTS Proline rich extensin signature 54 66 - -
Pvu3g0246 736 PRINTS Proline rich extensin signature 66 87 - -
Pvu3g0246 736 SMART serkin_6 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0246 736 MobiDBLite consensus disorder prediction 30 296 - -
Pvu3g0246 736 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 205 732 - -
Pvu3g0246 736 SUPERFAMILY Protein kinase-like (PK-like) 391 680 IPR011009 -
Pvu3g0246 736 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0246 Pvu-Chr3 2110161 2115274 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0246 297 732 Trihelix Transcription Factor Family AT5G38560 60.041 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu3g0246 PK_Tyr_Ser-Thr 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0246 - - vun:114173712 843.958