Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0221 ATGACACACCATTTCCTCCTCCTTTCTCTGTTATTCTTTGCATCCACATTCTCTCGTCTCGTCCCAACCGTCACCGCTGTTGACGCTTCCGGTGGTGACACGGACTTCACTCGTGCGCGTGCGGCCGTGTCCGCGGCGCTTGACGAGACGACCGCCGCCGCGGCCTACCTCTCGCAACAGACCGCGGCAACCAATAAGGATTCCGGCAATCCTGGCGGCGGCGCCGTGAAGGACTGCTTCACAAACCTAGAGGACGCAGTGGACATGATCCGTGACTCGTTGAAGCAGATGCAGAGCTTGAAACCGGACGGGGCTTCCGGTTCGGTCCGATTTGCGGCGAGCAACGTGCAGACGTGGATGAGCACGGCGCTGACGGACGTGGACACGTGTACGGACGGGTTTGAGGAAGTGGAAGGTCCCCTGAAGACGGACATAAGCGACCGCGTGGCCAAGGTGAAGAAGTCGATAAGCAATGCTTTGGCGCTGGTGAACGGTTTCGCTATGACGTTACCCGCCAATTGA 522 0.59 MTHHFLLLSLLFFASTFSRLVPTVTAVDASGGDTDFTRARAAVSAALDETTAAAAYLSQQTAATNKDSGNPGGGAVKDCFTNLEDAVDMIRDSLKQMQSLKPDGASGSVRFAASNVQTWMSTALTDVDTCTDGFEEVEGPLKTDISDRVAKVKKSISNALALVNGFAMTLPAN* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0221 173 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 166 IPR035513 -
Pvu3g0221 173 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 39 167 - -
Pvu3g0221 173 PANTHER PECTINESTERASE INHIBITOR-LIKE 39 167 - -
Pvu3g0221 173 SMART PMEI_2 22 162 IPR006501 GO:0004857
Pvu3g0221 173 CDD PMEI-like_3 14 167 - -
Pvu3g0221 173 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 165 IPR035513 -
Pvu3g0221 173 Pfam Plant invertase/pectin methylesterase inhibitor 31 162 IPR006501 GO:0004857
Pvu3g0221 173 TIGRFAM PME_inhib: pectinesterase inhibitor domain 40 164 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0221 Pvu-Chr3 1900640 1901387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0221 75 164 Carbohydrate Esterase AT3G43270 33.333 9.96e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0221 - - pvu:PHAVU_003G021500g 315.849