Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0162 ATGCCTCTCTCCACCCCTTCCTTCTTCCTCCTCACCCTCTTCTTCTTCCTCCTCTTCAATCTTCAACCCTCTTTCTCCCAACAACAATTCTCATCCTTCAACACCTCACACTCCCCATGGCAACCATCTCAGAACAGAACCCTTATCTCTACCAACAAAAACTTCACTGCAGGCTTCTTTCCCCTACCAAACACCACCCTCTTCACCTTTTCCATTTGGTTTTCTCAAGTCCCTAATGCCAAAGGTATTGTGTGGAGTGACACCACCCGGGTCAACAGTTCTGGCTCTCTTGTCATCACCTCAGAATTTGAACTTCTCCTCAATGGTTCACCCTTTCAGGATACTGCCAATACTAATGCTTCCCAACTTGTTCTTGAGAACAATGGAAACTTGGTTTTTGGGAACTGGAGCAGCTTCAGGAACCCCACCAACACCATTTTGCCCAACCAGAACTTCACAGGGATTGAGCTTCTCTCCAGCAATGGGAAATTCAGGTTCATCAAGTCTCAGTTTCTGGTCCTCAACTCCACTGCTGATCAATACTATGGCACCCCAAATCCCTTGGTGGGCATGGATGATGCAGGGAAAATGAGCATGGTAGGTAACTCTTTTCTCACTTCAGATTATGGAGACCCCAGATTGAGGAAAGTGGTCCTTGATGATGATGGGAATCTGAGGATCTATAGCTTCTACCCTGAGCAGAATAACAAGTGGGTTGAGGTTTGGAAAGGGTTATGGGAGATGTGCAGGATCAAGGGCAAATGTGGGTCTAATGCAATTTGTGTGCCTGGAGAGGATTTGAACAGTTCTACTCATTGTGTTTGCCCATCTGGGTTCAACCCAAACCAAGGTGGATCTGAAGAGGGTTGCACAAGGAAAAAGTCTCTTTCACAAGACACCAAATTTGTGAGGTTGGACTATGTGAACTACACCAGTGATGGCAGTTTGACAGAAATTAAAGCTGGGAACTTTACAATCTGTGAGTCCGGTTGCTCAACAGATAAAACTTGTCTTGGTTTTGGGTTCAAATATGATGGAACTGGCTACTGTGTGTGGTTGACTGGGACAAACCTTCAATTTGGGTACTGGTCACCAGGCACTGAAGCCGCCTTTTTTCTCAAAGTTGATAAATCTGAGTCAACACCATCCAACTTCATTGGCCTCACTGAGGTGATGCAAACCACATGCCCAGTGAACTTGAGCCTGCCACTGCCTCCAAAGGACTCAAACACCACTGCCAGAAACATTGCCATAATATGCACACTTTTTGCTGCAGAACTCATAGCTGGGGTGGCCTTCTTCTGGTCCTTCCTCAAGAGGTACATCAAGTATAGGGACATGGCCACCACACTAGGCCTGGAGCTTCTCCCTGCCGGGGGTCCCAAGAGGTTCACCTACTCAGAAATCAAGGCTGCCACCAATGACTTCTCCAATCTCATAGGCAAAGGAGGCTTTGGAGATGTCTACAAAGGTGAGTTGCCAGACCACAGGGTGGTGGCAGTGAAGTGCCTCAAGAATGTCACAGGTGGAGATGCTGAGTTTTGGGCAGAAGTCACAATCATTGCCAGAATGCACCACCTCAACTTGGTGAGGCTTTGGGGTTTCTGTGCTGAGAAGGGCCAAAGGATCCTAGTCTATGAACACATCCCATGTGGCTCAATGGACAAGTACCTCTTCAGGGTCAACAAGTCTCACAGTAACAATGACAAACACCTCAAAGACCAATCAAGTCCAAACACCCCACAACAAAAACCAACCTTGGATTGGAACATGAGGTACAGAATAGCCCTTGGTGTGGCAAGGGCTATTGCCTATTTACATGAAGAGTGTTTGGAGTGGGTTTTGCACTGTGACATCAAGCCTGAGAACATTTTACTGGGTGATGATTTTTGCCCCAAGATATCAGATTTTGGGCTGGCCAAGTTGAGGAAAAAGGAGGACATGGTGACCATGTCAAGGAGGAGGGGAACACCAGGGTACATGGCCCCTGAATGGGTCAATTCTGCTGAACCAATCACTTCAAAAGCTGATGTTTATAGTTTTGGCATGGTGCTTTTGGAGCTTGTGAGTGGAATTAGGAACTTTGAGATCCAAGACTCTGTGCTTAGGAGTGAAGAGTGGTACTTCCCAGGTTGGGCTTTTGATAAGTTCAAGGAGATGAGAGTGGAGGAGATTTTAGATAGACAGATTAGGAATGATTATGATAGCAGGGCCCACTTTGACATGGTTAATAGGATGGTCAAGACTGCCATGTGGTGTCTACAAGAAAAGCCTGTGTTGAGGCCCACTATGGGCAAGGTGGCCAAGATGTTGGAAGGGACTGTGGAGATCCTTGAGCCCAAGAAGCCCACTGTTTTCTTCCTTGGGGTGGAAGAGTAG 2379 0.4695 MPLSTPSFFLLTLFFFLLFNLQPSFSQQQFSSFNTSHSPWQPSQNRTLISTNKNFTAGFFPLPNTTLFTFSIWFSQVPNAKGIVWSDTTRVNSSGSLVITSEFELLLNGSPFQDTANTNASQLVLENNGNLVFGNWSSFRNPTNTILPNQNFTGIELLSSNGKFRFIKSQFLVLNSTADQYYGTPNPLVGMDDAGKMSMVGNSFLTSDYGDPRLRKVVLDDDGNLRIYSFYPEQNNKWVEVWKGLWEMCRIKGKCGSNAICVPGEDLNSSTHCVCPSGFNPNQGGSEEGCTRKKSLSQDTKFVRLDYVNYTSDGSLTEIKAGNFTICESGCSTDKTCLGFGFKYDGTGYCVWLTGTNLQFGYWSPGTEAAFFLKVDKSESTPSNFIGLTEVMQTTCPVNLSLPLPPKDSNTTARNIAIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKAATNDFSNLIGKGGFGDVYKGELPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEHIPCGSMDKYLFRVNKSHSNNDKHLKDQSSPNTPQQKPTLDWNMRYRIALGVARAIAYLHEECLEWVLHCDIKPENILLGDDFCPKISDFGLAKLRKKEDMVTMSRRRGTPGYMAPEWVNSAEPITSKADVYSFGMVLLELVSGIRNFEIQDSVLRSEEWYFPGWAFDKFKEMRVEEILDRQIRNDYDSRAHFDMVNRMVKTAMWCLQEKPVLRPTMGKVAKMLEGTVEILEPKKPTVFFLGVEE* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0162 792 Gene3D Phosphorylase Kinase; domain 1 448 548 - -
Pvu3g0162 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 153 IPR036426 -
Pvu3g0162 792 SUPERFAMILY Protein kinase-like (PK-like) 457 772 IPR011009 -
Pvu3g0162 792 PANTHER OS10G0101000 PROTEIN 10 789 - -
Pvu3g0162 792 PIRSF SRK 2 792 IPR024171 GO:0004674
Pvu3g0162 792 ProSitePatterns Protein kinases ATP-binding region signature. 480 502 IPR017441 GO:0005524
Pvu3g0162 792 Pfam S-locus glycoprotein domain 211 282 IPR000858 GO:0048544
Pvu3g0162 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pvu3g0162 792 ProSiteProfiles PAN/Apple domain profile. 290 376 IPR003609 -
Pvu3g0162 792 Gene3D Transferase(Phosphotransferase) domain 1 568 782 - -
Pvu3g0162 792 CDD STKc_IRAK 480 773 - -
Pvu3g0162 792 PANTHER OS07G0415500 PROTEIN 10 789 - -
Pvu3g0162 792 ProSiteProfiles Protein kinase domain profile. 474 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0162 792 SMART serkin_6 474 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0162 792 Pfam Protein kinase domain 478 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0162 Pvu-Chr3 1450139 1452921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0162 308 783 Receptor kinase-like Gene Family AT4G18250 33.874 7.32e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu3g0162 Pkinase 2.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0162 - - gmx:100775518 1296.18