Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0161 ATGGGTTTTGTTTCTTGGGTTGTTGGGTTGTTGTTTTTTGTGGGGTTTGAGTGTGCGTGGTGTCAAGATGATGTTGTGATGAACATGTTGAAGAAGGCCGTCAAAGAATCGGATGGTCTTCAATGGAATGACCCGGATGTGTGTAAATGGAAGCACGTTCAGTGCAGCGCCATGAAGAGGGTCACTGCAATTCAAATTGGGGGACAGAGTTTGCAGGGTTCTCTGCCAAAGGAACTGGGGCAGCTCTCGGAGTTGACACGGTTTGAGTGCATGAGCAATAACTTCACTGGGCCATTTCCTAACATGCCAAAGTCCCTTGAGGTTCTGCTCATCCACAACAACAATTTCCAATCCTTTCCGGGTGATTTCTTCACCGGCATGACCAATTTGCAGTCTGTGAGCATTGGCTACAACCCTTTTTCACAGTGGGGGATTCCTGATAGCCTCAAGGAATGTGTGGCTCTCAGGAGTTTCTCTGCAATCAATGCTGGCTTTGTGGGGAAAATCCCTGATTTTTTTGGTAAAGATGGTCCCTTCCCAGGTTTGGTTTCTCTTGCCTTGAGTTTTAATTCTCTTGAAGGAGGGTTGCCTGCAACCCTTTCTGGGAGTTCTGTGGAGACACTATGGTTGAATGGTCAGAAAAGTAGTAGTAAACTCAATGGTACCCTTGATGTGCTAAAGAGCATGACATATTTGAAACAAATTTGGGTGCATGGTAACTCGTTCACAGGTCCTATACCGGACTTGTCAAAACATGATCAACTATATGATGTGAGCTTTAGGGATAACCAGTTAACTGGGGTTGTTCCACCCTCTCTTACTGCTCTTCCTGCACTTAAAGTAGTGAATTTGACCAATAACTTACTTCAAGGCTCTCCTCCCTTGTTCAGAAATGGAGTGCAGGTTGATAATGATTTAGAGAAGGGGATCAATAGTTTTTGCACAATGGAGGCTGGTAAGCCATGCAGTCCTCTTGTGGATGCTTTACTTTCTGTTGTTGAACCTTTTGGATATCCTCTAAGACTTGCTGAAAGTTGGAAGGGGAATGACCCTTGTGGTCAAAGATGGTTGGGGATTGTTTGTGCAAATGGTAACGTTTCCGTCATTAACTTGCAGAACATGAATCTCTCTGGCAACATTTCTCCCAGTTTTGCTTTGCTTACATCTGTGACAAAGTTGCTTCTTGGAGGCAATAGCCTCACTGGTACCATACCAAGTCAACTCACCAGCATGCCTCTTTTGGTAGAATTGGATGTCTCCAACAATCAATTGCTCGGAAAGGTGCCGTCTTTTCGTGGGGGTGTAGCTGTTAAAACTGATGGGAATCCTGATATTGGAAAGGATAAACCTCAAGCCCCACCAGACTCCAGTTCTCCGGGTAAATCTGGAGGTCAAGTTACGAAAAATAATACTGGAGCAATTGTTGGCACTGTGTTGGGAGGTGTCAGTTTACTTGGTTTAGGGGCTTTCATATTTCTTATGTATAGTAGAAAACGTAAGCGCGCAGGCAAAGTTCAAAGTCCTAGTGCAATAGTGATACATCCTCGTTATTCTGGAGATGGAAATGGTCTGAAGATAAGTGTTGCAGATGCTGGTGTTAGTGGTGGTGGAGGTGGTGGTGGAGGAGGAATTAGTGCTCTCAGTCCAGCTAGTAGTATTCAACATGTGGAGGCTGGTAGTATGGTCATTTCAATCCAAGTTTTGAGACAAGTTACAAACAATTTCAGTCAGGGAAATATATTGGGGAGAGGTGGTTTTGGCACTGTATACAAAGGGGAATTGTACGATGGAACAAAAATTGCAGTGAAAAGGATGGAATCTGGAATGATGGGTGAGAAGGGGCTGGGAGAGTTTGAGTCTGAAATTGCAGTACTTACTAAGGTTCGACACAGACATCTGGTTGCACTAGAAGGCCACTGCTTGGATGGACATGAGAAGCTTCTTGTGTATGAATACATGCCTCAGGGTCCTCTCAGTAAACATTTATTTGACTGGAAAGAAGAAGGGATACAACCACTGGATTGGAAGAGAAGGCTCTCCATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCACGGTTTGGCCCAACAAATTTTTATCCATAGGGATCTAAAACCATCAAACATCTTGCTTGGGGATGATATGCGGGCCAAAGTCTCAGACTTTGGATTGGTTCGGCTTGCCCCAGAAGGACAGACCTCATTTGAAACTAGGCTTGCTGGTACTTTTGGATATTTGGCTCCAGAGTATGCAGTGACTGGACGAGTTACAACAAAGGTTGATGTTTACAGCTATGGAGTGATTCTGATGGAGATGCTAACAGGAAGGAGAGCAATTGACAACAGCCAACCAGAAGAGAATGTCCACCTTGTTACATGGTTCAGGAGGATGCTACTGAACAAGGACTCTTTTGGCAAGATTGTTGACCCCATAATGTGTGTTGATGAGGAGGCCTTGCCCAGTTGCAGGACTGTGGCTGAGTTGGCTGGTCACTGTTGTGCAAGAGAACCTCACCAGCGTCCAGACATGAGCCATGTGGTGAATGTCCTAGCCCCTCTTGTGGAGATTTGGAAGCCTTCTGAGACAGATGATGAAGATGTTTATGGCATTGACTTGGATATGACATTGCCACAAGCACTCAGTAAGTGGCAGGCTCTTGGAGGAAGGAACACCTTTGATGGATCAACCTCTTCATCAATGCTTACCAGTGGAGAAAATACACAGTCTAGCATACCAACTAGGCCATTTGGATTTGCTAATTCTTTTAATTCCTCTGATGGAAGATGA 2790 0.4473 MGFVSWVVGLLFFVGFECAWCQDDVVMNMLKKAVKESDGLQWNDPDVCKWKHVQCSAMKRVTAIQIGGQSLQGSLPKELGQLSELTRFECMSNNFTGPFPNMPKSLEVLLIHNNNFQSFPGDFFTGMTNLQSVSIGYNPFSQWGIPDSLKECVALRSFSAINAGFVGKIPDFFGKDGPFPGLVSLALSFNSLEGGLPATLSGSSVETLWLNGQKSSSKLNGTLDVLKSMTYLKQIWVHGNSFTGPIPDLSKHDQLYDVSFRDNQLTGVVPPSLTALPALKVVNLTNNLLQGSPPLFRNGVQVDNDLEKGINSFCTMEAGKPCSPLVDALLSVVEPFGYPLRLAESWKGNDPCGQRWLGIVCANGNVSVINLQNMNLSGNISPSFALLTSVTKLLLGGNSLTGTIPSQLTSMPLLVELDVSNNQLLGKVPSFRGGVAVKTDGNPDIGKDKPQAPPDSSSPGKSGGQVTKNNTGAIVGTVLGGVSLLGLGAFIFLMYSRKRKRAGKVQSPSAIVIHPRYSGDGNGLKISVADAGVSGGGGGGGGGISALSPASSIQHVEAGSMVISIQVLRQVTNNFSQGNILGRGGFGTVYKGELYDGTKIAVKRMESGMMGEKGLGEFESEIAVLTKVRHRHLVALEGHCLDGHEKLLVYEYMPQGPLSKHLFDWKEEGIQPLDWKRRLSIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQTSFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEMLTGRRAIDNSQPEENVHLVTWFRRMLLNKDSFGKIVDPIMCVDEEALPSCRTVAELAGHCCAREPHQRPDMSHVVNVLAPLVEIWKPSETDDEDVYGIDLDMTLPQALSKWQALGGRNTFDGSTSSSMLTSGENTQSSIPTRPFGFANSFNSSDGR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0161 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Pvu3g0161 929 Pfam Leucine rich repeat N-terminal domain 30 56 IPR013210 -
Pvu3g0161 929 Pfam Leucine rich repeat N-terminal domain 327 361 IPR013210 -
Pvu3g0161 929 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Pvu3g0161 929 SMART serkin_6 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0161 929 CDD STKc_IRAK 581 854 - -
Pvu3g0161 929 Pfam Protein tyrosine and serine/threonine kinase 577 850 IPR001245 GO:0004672|GO:0006468
Pvu3g0161 929 Gene3D Ribonuclease Inhibitor 22 320 IPR032675 -
Pvu3g0161 929 Gene3D Phosphorylase Kinase; domain 1 545 652 - -
Pvu3g0161 929 Gene3D Ribonuclease Inhibitor 325 449 IPR032675 -
Pvu3g0161 929 ProSiteProfiles Protein kinase domain profile. 575 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0161 929 Gene3D Transferase(Phosphotransferase) domain 1 653 871 - -
Pvu3g0161 929 PANTHER OSJNBA0070M12.3 PROTEIN 4 929 - -
Pvu3g0161 929 SUPERFAMILY Protein kinase-like (PK-like) 554 851 IPR011009 -
Pvu3g0161 929 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 4 929 - -
Pvu3g0161 929 MobiDBLite consensus disorder prediction 437 467 - -
Pvu3g0161 929 MobiDBLite consensus disorder prediction 895 929 - -
Pvu3g0161 929 SUPERFAMILY L domain-like 41 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0161 Pvu-Chr3 1438553 1443318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0161 61 857 Receptor kinase-like Gene Family AT5G07280 30.566 3.07e-74 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pvu3g0161 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0161 - K00924 gmx:100776064 1523.84