Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0160 ATGTTTCTTGCACTCTCTTCTTTCGTAACCCTCTTTCTTTTGGCTTCTAATGAAGTTGTGTTAGCAAATTTTCACCATTATCATCACCATGTTCAGGATGATAAGTCAGTGCTTGTTGAGAGGTTGATTACTGTTGATCAATCTGGGCATGGAGACTTCACCAAGATACAAGCTGCCATTGATTCAGTCCCTTCCAACAACAAGAACTGGATTTCCATCAAAGTCAATTCAGGCACCTACAGGGAGAAGGTGATGATTCCTGAAGACAAGCCTTATATAGTCCTAAAAGGAGTGGGAAAAAGGTGCACCATTGTTGAGTGGGATGACCATGATTCAAGTGCACAGAGTCCTACATTCTTAAGCATGGCTGACAATATTGTGGTCAAGGCCATAACCTTCAGGAATACTTACAATGATGCAAAGAAAGGGAACCCCATGACACCTGCATTAGCTGGAATGATAACTGGAGACAAGACATCATTCTTTCAAGTTGGCTTCTATGGTTTGCAAGACACTTTGTGGGATGTTAAAGGAAGACACTACTTCAATTCTTGCACCATTGAAGGTGCTATGGATTTCATCTTTGGTGCTGGTCAATCTTTACATGAGAATTGTATGATATCAGTTCGTGAAGCGTTTCCAGGTAAAGCAGTGATAGGTTTCATCACAGCACAAGGGAGGACAGATCCAGAAGATTCAAATGGTTTTGTTTTCAAGAACTGCAAAATCTTTGGAGTTGGTAAAACTTACTTGGGAAGACCATGGAGAGACTATGCCAGAGTTCTTTTCTACAAAACTATGATGTCTTCCATCGTCCAACCACTAGGTTGGCAGCCATGGAACTCCACTTCCAATGTAGCTAAAGTAACATTCGCAGAGAGTGATAATTTTGGACTTGGTTCGTCCTTGTCAGGGAGAGTGAGTTGGTTGAAGAAATTGGATCCAGCAACTATCACAAACATGACAAGTATACGGTTCGTGGACACCGAAGGTTGGATCAACGCTCATCAAATCTTGTAA 1020 0.4157 MFLALSSFVTLFLLASNEVVLANFHHYHHHVQDDKSVLVERLITVDQSGHGDFTKIQAAIDSVPSNNKNWISIKVNSGTYREKVMIPEDKPYIVLKGVGKRCTIVEWDDHDSSAQSPTFLSMADNIVVKAITFRNTYNDAKKGNPMTPALAGMITGDKTSFFQVGFYGLQDTLWDVKGRHYFNSCTIEGAMDFIFGAGQSLHENCMISVREAFPGKAVIGFITAQGRTDPEDSNGFVFKNCKIFGVGKTYLGRPWRDYARVLFYKTMMSSIVQPLGWQPWNSTSNVAKVTFAESDNFGLGSSLSGRVSWLKKLDPATITNMTSIRFVDTEGWINAHQIL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0160 339 PANTHER PECTINESTERASE 10-RELATED 25 336 - -
Pvu3g0160 339 Pfam Pectinesterase 43 328 IPR000070 GO:0030599|GO:0042545
Pvu3g0160 339 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 336 - -
Pvu3g0160 339 Gene3D - 37 339 IPR012334 -
Pvu3g0160 339 SUPERFAMILY Pectin lyase-like 39 335 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0160 Pvu-Chr3 1430672 1434085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0160 33 282 Carbohydrate Esterase AT2G19150 44.223 2.81e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0160 - - gmx:100812950 396.356