Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0159 ATGGTTTTTGGATGGTGCTGCTCTGTGTGTCTCTTATTTGTCTTGGTGGGTTTGAGAGTAGAGGAAGCCAATGCTCAGTTTTATAGAAAAGTTGGAACAAAACACTTACCTTACTGGTCAATAGTGGTGGATCAATCAGGGCATGGAAACTTCACTACAATACAATCTGCCATTGATTCAGTCCCTTCTCACAACATGTATTGGGTTTCCATCAAGGTCAAGGCTGGTACCTATAGAGAAAAAGTGAAGATTCCTTATGATAAGCCTTACATCATATTAAAAGGGGAGGGAAAGAGAAGAACTTTTGTTGAGTGGGATGACCATGATAATACCTCACAGAGTCCTACGTTTGCAGCCATGGCTGACAATATTGTTGTCAAATCCATGAGCTTTAGGAATTCATACAACAACCCAATAAATAGTAAAGCCAAGGTGCCTGCTGTGGCTGCAATGGTGAGTGGAGACAAGTCTTACTTTTTCAGAGTTGGTTTCTTCGGTTTGCAAGACACTTTATGGGACGACACAGGAAGACATTACTACAACCTTTGTACCATTCAAGGTGCCATTGATTTTATCTTTGGTGCAGCACAATCACTATTTGAGAGGTGTTCCATATCTGTGATTGGAGGGGCACTAGATCCTGGGTCACCAGGTTTCATCACAGCACAAGGGAGAACAAATTCAGAAGATGGAAATGGGTTTGTTTTCAAAGATTGCCATGTGTTTGGAAATGGTTCAACTTACTTGGGGAGGCCTTGGAGAAATCATGCTAGGGTTTTGTTTTACAAGACCAACATCTCCAACATTGTACAACCTTCTGGTTGGAATGCAGGAAAATTTGATCCATATCAGGGTGGCATAACATTTGCAGAGTATGGGAATTTTGGGCCAGGTTCTGACACTTCTGAAAGAGTGAGTTGGAGCAAGAAGTTGGACTTAGAAACAATTGAGAATATGACAAGCACCAAGTTCATAGACACTGATGGTTGGCTTCACAAACAACTATTTTAA 1011 0.4125 MVFGWCCSVCLLFVLVGLRVEEANAQFYRKVGTKHLPYWSIVVDQSGHGNFTTIQSAIDSVPSHNMYWVSIKVKAGTYREKVKIPYDKPYIILKGEGKRRTFVEWDDHDNTSQSPTFAAMADNIVVKSMSFRNSYNNPINSKAKVPAVAAMVSGDKSYFFRVGFFGLQDTLWDDTGRHYYNLCTIQGAIDFIFGAAQSLFERCSISVIGGALDPGSPGFITAQGRTNSEDGNGFVFKDCHVFGNGSTYLGRPWRNHARVLFYKTNISNIVQPSGWNAGKFDPYQGGITFAEYGNFGPGSDTSERVSWSKKLDLETIENMTSTKFIDTDGWLHKQLF* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0159 336 ProSitePatterns Pectinesterase signature 2. 185 194 IPR033131 -
Pvu3g0159 336 Gene3D - 39 335 IPR012334 -
Pvu3g0159 336 PANTHER PECTINESTERASE 10-RELATED 14 334 - -
Pvu3g0159 336 SUPERFAMILY Pectin lyase-like 40 332 IPR011050 -
Pvu3g0159 336 Pfam Pectinesterase 41 327 IPR000070 GO:0030599|GO:0042545
Pvu3g0159 336 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0159 Pvu-Chr3 1419106 1424951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0159 40 279 Carbohydrate Esterase AT2G19150 46.058 1.51e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0159 - - gmx:100819252 572.392