Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0151 ATGATGAAACCAAACTTGAACCTGGAACCTGAAGATGATTCAAAAATGTACAGCCAAGAAGGATCGGATGAATCACATGATTTTACTATGGACAACACAAGTTCCTCCTGTCTGACAAAGGCTGATCCTGATTCAGGTTCTCTGTCCCTGGACTTGACCCTCAACTTCAATCTCAGTGATGAAGAGTTGAAAGGTGCAACAAGTCACACTAACTCTGAATCAGGAGGTGAAACTCATGCCTCAGCAATAGCAGTTCCCAGAGTTTTCTCTTGTAACTATTGCAGGAGGAAATTCTTCAGCTCACAGGCATTAGGGGGCCATCAGAATGCTCACAAGAGGGAGAGGACATTGGCAAAACGTGCAATGAGAATGGGGATGCTCACTGAAAGGTACACAAGCTTAGCATCTCTGCCTCTCCATGGTTCTGCTTTTCGGTCTCTTGGCCTTGAAGCTCATGCTGCAATGCACCAAGCACATTTGCATACACTGAGAGCTCCTGATATGATGGCTGCAGCAAAATTCAGGAAAGACTATCTTCGGACACCAATCTTTGTTGAAGATGATGATGCTGGTGTGTTTTGGCCTGGCAGTTTCAGACAGATAGATGGAAGTACTAGGTTTGTAGCAGCTGCTCCTCCAGCACAAACATCTGCATCTCCTGATCTCACTCTGAGGCTTTGA 681 0.4552 MMKPNLNLEPEDDSKMYSQEGSDESHDFTMDNTSSSCLTKADPDSGSLSLDLTLNFNLSDEELKGATSHTNSESGGETHASAIAVPRVFSCNYCRRKFFSSQALGGHQNAHKRERTLAKRAMRMGMLTERYTSLASLPLHGSAFRSLGLEAHAAMHQAHLHTLRAPDMMAAAKFRKDYLRTPIFVEDDDAGVFWPGSFRQIDGSTRFVAAAPPAQTSASPDLTLRL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0151 226 MobiDBLite consensus disorder prediction 1 41 - -
Pvu3g0151 226 Gene3D Classic Zinc Finger 68 136 - -
Pvu3g0151 226 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Pvu3g0151 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Pvu3g0151 226 MobiDBLite consensus disorder prediction 1 27 - -
Pvu3g0151 226 PANTHER ZINC FINGER PROTEIN 3-RELATED 4 210 - -
Pvu3g0151 226 PANTHER ZINC FINGER PROTEIN JAGGED 4 210 IPR045320 GO:0003700
Pvu3g0151 226 SUPERFAMILY beta-beta-alpha zinc fingers 87 116 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0151 Pvu-Chr3 1364370 1367581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0151 87 200 C2H2 Transcription Factor Family AT1G66140 50.000 6.95e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu3g0151 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0151 - - gmx:100777133 336.265