Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0149 ATGGGTCGTGGGTTTCAAGTTCGAGCAGCTTCAATTACCATAGTTGCTCATTTGTTGTTCATAGCAATAACAACCCTTGTGTTACTTTGGTTGCTACACTTCCGAGAAGGTGTTGCCTTCTTCACCTCTTCCAACCCAATCAAGATTTTCAATCTCCATCCACTTCTAATGGTGATTGGATTCATTCTAGTTGGTGGAGAAGCTATCATGATATACAAGTCTGTGCTTCAAAAAAGGAGGTCAATGAAAGTGGTTCACCTCTTATTGCATCTGGTAGCTCTGGTGGCTGGAGTTTTAGGGATCATTGCAGTTTTCAAATCAAAGAAAGATGCTGGTCTTCCTGATATGTATACATTACACTCTTGGTTAGGCATGTCAGCAATATGCCTATTTGCTTTACAGTATATCATGGGGTTCTTCTCTTATTTCTTCCCTGGTGCAGAAATGTCCACTAGAGCTTCCCTTTTGCCATGGCACAGGTTTTTGGGCATGGCCATATTCCTTCTTGCAGTTTGCACAGCTGAGACTGGTTTGCTTCAATATTTCCAGTTTCTACACCTTTTTCGCAGCCAAGAGGCACTCATAGTCAATTCCACTGCTCTCTTACTCTTCCTCTATGCTCTCTTTGTTACTCTTTCTGTCATTCTCCCAAGAAATTATTCATAA 666 0.4144 MGRGFQVRAASITIVAHLLFIAITTLVLLWLLHFREGVAFFTSSNPIKIFNLHPLLMVIGFILVGGEAIMIYKSVLQKRRSMKVVHLLLHLVALVAGVLGIIAVFKSKKDAGLPDMYTLHSWLGMSAICLFALQYIMGFFSYFFPGAEMSTRASLLPWHRFLGMAIFLLAVCTAETGLLQYFQFLHLFRSQEALIVNSTALLLFLYALFVTLSVILPRNYS* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0149 221 Pfam Eukaryotic cytochrome b561 52 181 IPR006593 -
Pvu3g0149 221 ProSiteProfiles Cytochrome b561 domain profile. 15 215 IPR006593 -
Pvu3g0149 221 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 217 - -
Pvu3g0149 221 Gene3D - 5 220 - -
Pvu3g0149 221 SMART 561_7 52 178 IPR006593 -
Pvu3g0149 221 PANTHER CYTOCHROME B561-RELATED 6 217 IPR043205 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0149 Pvu-Chr3 1344547 1346634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0149 12 217 Chloroplast and Mitochondria Gene Families AT5G38630 43.128 1.28e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0149 K08360 - gmx:100785824 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0149 3 1344547 1346634 Pvu3g0149 3 1344547 1346634 ECH