Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0118 ATGGCTCACCATTGCTCAAACAAGGCCCTTGGTCTTCTCATTTTTCTGTCTCTTCTTTCAACCATTTGTTCTGCTCAACTGGTTCCTGAATTCACCCATTCTGAACCAGTTGATCCAGCTGATGCAGTAGCACCAGCACCTGAAGTTGATGAAGATGGAGCAGAACTAGCCCCAGCACCATCTATAGAATTTGAAAATGATGAACCCCTAACTCCACCACCACCTGCAAAAACAAATGAAAGACTCAAAAAAGCTCATATTGCTTTCAAGGCATGGAAGAAGGCTATTCACTCTGACCCTTTGAACATAACTGGAAATTGGGTTGGTGAAGATGTTTGCTCCTACAATGGTGTGTATTGTGCTCCTGCACTTCATGATCCCACCATCAATGTGGTTGCTGGCATTGATCTTAACAATGCAGACATTGCTGGGAACCTCCCTGAAGAGTTACTGCACTTGGAAGATATTGCACTTTTCCACATCAACTCCAATAGATTCTGTGGTGTGATCCCACAGAACCTGCAGAATCTCACACTCATGCATGAGTATGATATCAGCAACAACCGCTTTGTTGGTAGCTTTCCCTCTGTGGTTCTCACATGGCCGAACTTGAAGTACTTGGACCTCAGATTCAACGACTTTGAAGGAGCCATTCCCCCAGAGCTTTTTCACAAGAATCTTGATGCAATCTTCTTGAACAACAACCGTTTCACATCCATCATCCCAGACTCTCTGGGAAACTCCAGCGCCTCTGTGATCACCTTTGCCTACAACAACTTCAAAGGGTGCGTTCCAAATTCCATGGGAAACATGAGGAACTTGAACGAGATTGTGTTCATAGGGAACAACCTTGGAGGGTGCTTCCCGCAGGAGATTGGAACGATGGAAAATCTGAGGGTTTTGGATTTGAGCGGCAATGGGTTTGTGGGGACTCTTCCTAACTTGTCGGGGTTGAAGAGTGTTGAGGTGATTGACATTGCATACAACAAGATGAGTGGATATGTGTCTAACTCTGTTTGCCAGCTTCCTGCGTTGAAGAACTTCACGTTTTCGCACAACTACTTCAATGGGGAAGCTCAGAGCTGCGTGGCGGAGGGGAATTCTTCGGTGGCTTTGGATGACTCGTGGAATTGTTTGCCGGGAAGGAAGAATCAGAAGGCGTCGATGAAGTGCTTGCCGGTGCTGACTCGGCCTGTGGATTGCGTGAAGCAGTGTGGTGGAGGCAAAGAGAATGAGCATAGCCATTCGCCAAAGCCATCTCCTTCTCCTAAACCTCTGACACCAAAGGTTGTACACTCTTCACCTCCTCCTCCAGTTCACTCCCCACCACCACCTCCACCTGTCCATTCTCCACCACCACCACCACCACCACCAGTCAACTCTCCACCTCCACCACCACCACCAGTCAACTCTCCACCTCCACCACCGCCAGTTTTCTCTCCTCCTCCGCCAGTTTTCTCACCACCACCACCCCCAGTTTCCTCTCCACCACCACCCCCAGTTCACTCTCCTCCCCCACCAGTTCACTCTCCACCACCACCAGTTCACTCTCCTCCGCCACCAGTTTCCTCCCCACCACCACCACCAGTTCACTCTCCTCCGCCACCTGTTTTCTCTCCACCACCACCCCCAGTTTCCTCTCCACCACCACCAGTTCACTCTCCTCCCCCACCAGTTTCCTCCCCACCACCACCAGTCTCCTCCCCACCACCACCACCAGTCTCCTCTCCTCCACCACCAGTTCACTCTCCACCACCACCCGTTTTCTCTCCTCCTCCACCCGTTTTCTCTCCTCCACCACCACCAGTTCACTCTCCACCACCACCCGTTTTCTCTCCTCCTCCACCACCACCAGTTCACTCTCCTCCACCACCCGTTTTCTCTCCTCCTCCGCCAGTTTTCTCTCCACCCCCACCACCCTTAGTTTCCTCTCCTCCTCCACCAGTCTCCTCCCCACCACCTCCCCCAGTTTCCTCTCCACCACCACCAGTTAACTCTCCTCCTCCACCACCAGTCTCCTCCCCACCACCACCAGTCTCCTCTCCTCCTCCACCAATTTTCTCCCCACCACCACCAGTTTCCTCTCCACCACCCCCAGTGTACTCCCCACCACCACCGGTGTACCCTCCTCCACCACCAACATGGGATGATGTTTTCCTTCCACCACACTTTGGCGCTTCATACAAGTCACCTCCTCCACCAGTAATTGTTGGATACTAA 2220 0.5176 MAHHCSNKALGLLIFLSLLSTICSAQLVPEFTHSEPVDPADAVAPAPEVDEDGAELAPAPSIEFENDEPLTPPPPAKTNERLKKAHIAFKAWKKAIHSDPLNITGNWVGEDVCSYNGVYCAPALHDPTINVVAGIDLNNADIAGNLPEELLHLEDIALFHINSNRFCGVIPQNLQNLTLMHEYDISNNRFVGSFPSVVLTWPNLKYLDLRFNDFEGAIPPELFHKNLDAIFLNNNRFTSIIPDSLGNSSASVITFAYNNFKGCVPNSMGNMRNLNEIVFIGNNLGGCFPQEIGTMENLRVLDLSGNGFVGTLPNLSGLKSVEVIDIAYNKMSGYVSNSVCQLPALKNFTFSHNYFNGEAQSCVAEGNSSVALDDSWNCLPGRKNQKASMKCLPVLTRPVDCVKQCGGGKENEHSHSPKPSPSPKPLTPKVVHSSPPPPVHSPPPPPPVHSPPPPPPPPVNSPPPPPPPVNSPPPPPPVFSPPPPVFSPPPPPVSSPPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPPVHSPPPPVFSPPPPPVSSPPPPVHSPPPPVSSPPPPVSSPPPPPVSSPPPPVHSPPPPVFSPPPPVFSPPPPPVHSPPPPVFSPPPPPPVHSPPPPVFSPPPPVFSPPPPPLVSSPPPPVSSPPPPPVSSPPPPVNSPPPPPVSSPPPPVSSPPPPIFSPPPPVSSPPPPVYSPPPPVYPPPPPTWDDVFLPPHFGASYKSPPPPVIVGY* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0118 739 ProSiteProfiles Leucine-rich repeat profile. 297 319 IPR001611 GO:0005515
Pvu3g0118 739 MobiDBLite consensus disorder prediction 418 707 - -
Pvu3g0118 739 SUPERFAMILY L domain-like 94 361 - -
Pvu3g0118 739 MobiDBLite consensus disorder prediction 406 707 - -
Pvu3g0118 739 MobiDBLite consensus disorder prediction 719 739 - -
Pvu3g0118 739 Gene3D Ribonuclease Inhibitor 84 379 IPR032675 -
Pvu3g0118 739 PRINTS Proline rich extensin signature 414 426 - -
Pvu3g0118 739 PRINTS Proline rich extensin signature 426 447 - -
Pvu3g0118 739 PRINTS Proline rich extensin signature 447 463 - -
Pvu3g0118 739 PRINTS Proline rich extensin signature 464 481 - -
Pvu3g0118 739 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 78 418 - -
Pvu3g0118 739 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 488 572 - -
Pvu3g0118 739 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 638 736 - -
Pvu3g0118 739 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 570 639 - -
Pvu3g0118 739 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 488 572 - -
Pvu3g0118 739 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 638 736 - -
Pvu3g0118 739 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 78 418 - -
Pvu3g0118 739 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 570 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0118 Pvu-Chr3 1072645 1075091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0118 62 406 Trihelix Transcription Factor Family AT3G19020 62.248 3.01e-162 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0118 - - aprc:113870095 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0118 3 1072645 1075091 Pvu3g0118 3 1072645 1075091 ECH