LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g0110	ATGGTCCCTCTTATAAGAAACAAAACACACAACCTCATTCCCACACCACCAACCACTTCCTTCCTCTCTCGCATTCTCTCTTCAGCCATGTCATCTTCTTCATCAAACTCCGATCACCTTCCTCTCAAACCGATCCCCGGAAGCTACGGCTTCCCATTCTTCGGACCCATAATCGACCGCCACAACTACTTCTACCACGAGGGCCGCGACAACTTCTTCGCCGCCAGAGTCCGCCGCCACAACTCCACCGTCATCCGCACCAACATGCCGCCGGGGCCCTTCATCGCCTCCGACCCGCGCGTCGTGGCGCTGCTGGACGGCGCCTCCTTCCCCATCCTCTTCGACAACCAGAAAGTCCAGAAGCTCGACGTCCTCGACGGCACCTTCATGCCCTCCACCAAGTTCACCGGCGGCTTCCGCGTCTGCGCCTACCTGGACACGGCGGAGCCCAACCACGAACTCATCAAGGGGTTCTTCCTCCAAGCCCTGGCCCGGCGGAAAGACGCCGTGCTCCCTCTCTTCCGAAACTGCCTCGGCGAGTCCTTCGCGGAGATCGAAGAGCAGATGAGTAAGAACAAGAAAGCAGATTTCAACGGTGTGTTCAGCCAAGCTTCCTTCAACTTCATCTTCAGATTGTTCTGCGATAACAAAGATCCTTCCCAAACCAACCTCGCTTCCAAGGGGCCGAAGCTGGTGGACACGTGGCTTCTGTTTCAGCTGGCCCCACTTGCGACGCTTGGTCTCCCGAAAATCTTCAACTACATCGAAGACTTCCTCATCCGCACGCTCCCCTTCCCCGCGTGCATCACAAAGTCCGGTTACAACTCTCTGTACGACGCCTTCAAAACCCACGCCACCGCGCTCCTCGACGAGGCCCAGAAGCTGGGCCTGGACCGGGACGAGGCCTGCCACAACGTGGTCTTCACCGCGGGCTTCAACGCCTACGGCGGGCTCAAGAACCAGTTCCCGGTGCTCCTGAAATGGGTGGGCCTCGCGGGCGAGAAGCTCCACGAGGAGCTCGCGCGCGAGGTTCGGCGCGTGGTGAACGCCGAAGGAGGAGTGACGCTGAACGCGCTGGAGAAGATGCCGCTGGTGAAATCCGTTGTGTACGAGATGCTGCGGATCGAACCGGCGGTGCCGTACCAGTACGCGCGCGCGAGGGAGGACTTGGTGGTGCGTAGCCACGACGCGTCGTTCGAGGTGAAGAAGGGGGAGATGCTGTTCGGGTACCAGCCGTTTGCGACGAAGGATCCGAGGATCTTCGAGGATGCGGAGGTTTTCGTGGCGCGGAGGTTTGTGGGCGAAGGGGAGAAGCTTCTGAAACACGTGCTTTGGTCGAACGGGAAGGAAACGGAGGAACCTTCTGTGAGTAATAAGCAGTGCCCCGGGAAGAATCTGGTGGTGCTCCTGTGCAGGTTGCTTCTGGTGGAACTCTTCTTACGATACGACACCTTTGAGTTTGAGTTTAAACAATCTGGGTTTGGTCCAAGTGTTACCATTACGTCCCTCACCAAAGCTTCTACCTTCTAA	1530	0.581	MVPLIRNKTHNLIPTPPTTSFLSRILSSAMSSSSSNSDHLPLKPIPGSYGFPFFGPIIDRHNYFYHEGRDNFFAARVRRHNSTVIRTNMPPGPFIASDPRVVALLDGASFPILFDNQKVQKLDVLDGTFMPSTKFTGGFRVCAYLDTAEPNHELIKGFFLQALARRKDAVLPLFRNCLGESFAEIEEQMSKNKKADFNGVFSQASFNFIFRLFCDNKDPSQTNLASKGPKLVDTWLLFQLAPLATLGLPKIFNYIEDFLIRTLPFPACITKSGYNSLYDAFKTHATALLDEAQKLGLDRDEACHNVVFTAGFNAYGGLKNQFPVLLKWVGLAGEKLHEELAREVRRVVNAEGGVTLNALEKMPLVKSVVYEMLRIEPAVPYQYARAREDLVVRSHDASFEVKKGEMLFGYQPFATKDPRIFEDAEVFVARRFVGEGEKLLKHVLWSNGKETEEPSVSNKQCPGKNLVVLLCRLLLVELFLRYDTFEFEFKQSGFGPSVTITSLTKASTF*	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g0110	509	PRINTS	E-class P450 group IV signature	362	378	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu3g0110	509	PRINTS	E-class P450 group IV signature	415	433	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu3g0110	509	PRINTS	E-class P450 group IV signature	461	479	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu3g0110	509	PANTHER	CYTOCHROME P450 26	34	507	-	-
	Pvu3g0110	509	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	34	507	-	-
	Pvu3g0110	509	SUPERFAMILY	Cytochrome P450	40	486	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu3g0110	509	Pfam	Cytochrome P450	337	437	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Pvu3g0110	509	Gene3D	Cytochrome P450	36	508	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g0110	Pvu-Chr3	1016270	1020228	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu3g0110	32	507	Cytochrome P450	AT5G42650	50.837	9.98e-173	495

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g0110	K01723		-	gmx:100801764	832.787

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu3g0110	3	1016270	1020228	Pvu3g0110	3	1016270	1020228	ECH