Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0070 ATGAGTTCAAGATCCTTGAGGGGTAGCCGTCAGAGGAAGGCCTTGCAGTTGGACCTGAACCTCATGCCACCATTAGAGGAGACTACTGTGCAGAATGCTGTTGATCCAAACGAGGATGATGATGATGATGTGGTTGAACTGTCACCAACTACATTTGCTCAGGCTAGGAGCAATCAGAGGAGGAGGATTCACAGGAGGAGCATTTATGATATAGATGAAGAGACTGGAGAATTGCCAAAACAGATAGTGATTGATGGAAAAATCTATAGAACTGTGGAAACTGGTAGCAGTTCTACGGAGGACAATGCAAAGAAGGAGAATGAAAAGAAGTCACCTGAACCACCTCCTAAGAAACCTGTACTTGATTGTCCAATATGCATGGCTGCTTTTGTAGAACCCATGTCTACCAGGTGTGGTCATATCTTTTGCAGGGGTTGCATTACCACTGCAATATCTACACAGAATAAGTGCCCTACCTGCAGAAAGAAGGTTACAAAGAACCAACTCATAAGGGTCTTTCTTCCATCTCTTAGTTAA 537 0.4376 MSSRSLRGSRQRKALQLDLNLMPPLEETTVQNAVDPNEDDDDDVVELSPTTFAQARSNQRRRIHRRSIYDIDEETGELPKQIVIDGKIYRTVETGSSSTEDNAKKENEKKSPEPPPKKPVLDCPICMAAFVEPMSTRCGHIFCRGCITTAISTQNKCPTCRKKVTKNQLIRVFLPSLS* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0070 178 Pfam Zinc finger, C3HC4 type (RING finger) 123 160 - -
Pvu3g0070 178 SUPERFAMILY RING/U-box 122 167 - -
Pvu3g0070 178 SMART ring_2 123 160 IPR001841 -
Pvu3g0070 178 PANTHER ELFLESS, ISOFORM B 3 176 - -
Pvu3g0070 178 MobiDBLite consensus disorder prediction 91 118 - -
Pvu3g0070 178 ProSitePatterns Zinc finger RING-type signature. 138 147 IPR017907 -
Pvu3g0070 178 MobiDBLite consensus disorder prediction 1 43 - -
Pvu3g0070 178 MobiDBLite consensus disorder prediction 99 116 - -
Pvu3g0070 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 177 IPR013083 -
Pvu3g0070 178 ProSiteProfiles Zinc finger RING-type profile. 123 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0070 Pvu-Chr3 647998 650834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0070 39 176 C3H Transcription Factor Family AT3G07200 43.478 8.27e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0070 K22651 - gmx:100778432 154.066