Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0066 ATGGCTCAGGTTCCGTTTCCGTCGAACCTTTTGCCGGGAGATGGAAGCCCTGAGTGGATGAGTAAGGCAGACAATGCATGGCAGCTTGTGGCGGCAACACTGGTGGGTCTGCAGAGTGTGCCAGGGCTCATAATATTGTATGGAGGAGCTGTGAAGAAGAAATGGGCGGTGAACTCAGCATTCATGTCGCTCTATGCTTTTGCATGTGTGATTTTCTGTTGGGTTGTGTGGGGATACAGAATGTCCTTTGGTGACAAACTTGTGCCTTTCTGGGGAAAGCCTGGTGTGTCACTTGATCATGTGTATCTGTTCGAGAGGGCCTTTTTGGGGGCTTTTCCTAATGCGACAATGGTGTATTTCCAGGGTGTGTTTGCAGCCATTACTCTGATTCTCATTGCTGGGGCTGTGTTGGGGCGCATGAACTTCTATGCTTGGATGATCTTTGTGCCTTTGTGGCTCACATTCTCCTACACCTTCACAGCTTTCAGCATATGGAGTACTAATGGCTTTTTGTCCAAAATGGGGATAATAGATTACTCAGGTGGATATGTCATCCATTTGTCTTCTGGGGTTGCTGGTTTCACAGCTGCATATTGGGTTGGACCAAGGTTGAACAAGGACAGGGAAAGGTTTCCTCCAAACAACATCCTTCTGATGCTGGCAGGTGCAGGGCTGTTGTGGATGGGGTGGACAGGGTTCAACGGAGGAGATCCATACTCAGTGAACTCAGATGCTTCCCTTGCCGTCCTCAACACCCACGCTTGCACTGCCACCAGCTTGCTCACTTGGGTCATTCTTGATGTCATCTTCTTCCGAAAGCCTTCTGTCATTGGAGCTGTTCAAGGCATGATCACTGGTTTGGTCTGCATTACCCCTGCTGCAGGAGTTGTGCAGGGATGGGCAGCACTTTTAATGGGAGTATTCTCTGGGTCAATTCCTTGGTTCACCATGATGGTGATCCACAAGAGATCAAAGCTACTGCAGAAGGTTGATGACACAATGGCAGTGTTCCACACTCACGCAGTTGCAGGAACCCTAGGAGGACTCCTCACCGGACTCTTTGCCGAGCCAAGACTGAACCAAATGTTCTATGGATTTCCAGGCCAATACGTTGGCTTTTTCTATGGTTTCCATCCCAACATGATGCACTCAGCGTTCAGGCAAATGGGGATCCAAATCCTTGGCATTCTCTTTGTCGTCTTTGTCAATGTTATCAGCACAAGCTTGATTTGCCTCTTCATCAGACTTTTTGTTCCACTCAGAATGTCTGAAGAGGATATGGAGATTGGTGATGAGGCTGCTCATGGGGAAGAGGCTTATGCCATCTGGGGTCAGGGTGACAAGCTTGAAAATTCAAGTTCAAAGTATGGAAGTTCGTTGTATGATGATGTTGAATCTGGGGCACCCAAGAAGAAACATGGTGGCATGGTTGAGATGATGTAG 1443 0.483 MAQVPFPSNLLPGDGSPEWMSKADNAWQLVAATLVGLQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVIFCWVVWGYRMSFGDKLVPFWGKPGVSLDHVYLFERAFLGAFPNATMVYFQGVFAAITLILIAGAVLGRMNFYAWMIFVPLWLTFSYTFTAFSIWSTNGFLSKMGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVNSDASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALLMGVFSGSIPWFTMMVIHKRSKLLQKVDDTMAVFHTHAVAGTLGGLLTGLFAEPRLNQMFYGFPGQYVGFFYGFHPNMMHSAFRQMGIQILGILFVVFVNVISTSLICLFIRLFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVESGAPKKKHGGMVEMM* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0066 480 ProSitePatterns Ammonium transporters signature. 178 203 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pvu3g0066 480 MobiDBLite consensus disorder prediction 458 480 - -
Pvu3g0066 480 PANTHER AMMONIUM TRANSPORTER 4 480 - -
Pvu3g0066 480 TIGRFAM amt: ammonium transporter 24 440 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu3g0066 480 SUPERFAMILY Ammonium transporter 19 422 - -
Pvu3g0066 480 PANTHER AMMONIUM TRANSPORTER MEP2 4 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pvu3g0066 480 MobiDBLite consensus disorder prediction 465 480 - -
Pvu3g0066 480 PRINTS Rhesus blood group protein signature 121 137 IPR002229 GO:0005887
Pvu3g0066 480 PRINTS Rhesus blood group protein signature 217 235 IPR002229 GO:0005887
Pvu3g0066 480 PRINTS Rhesus blood group protein signature 248 270 IPR002229 GO:0005887
Pvu3g0066 480 Gene3D Ammonium transporter AmtB like domains 13 444 IPR029020 -
Pvu3g0066 480 Pfam Ammonium Transporter Family 26 440 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0066 Pvu-Chr3 620871 623627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0066 115 474 Inorganic Solute Cotransporters AT2G38290 61.667 6.48e-147 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0066 K03320 - gmx:100787856 889.797