Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0065 ATGGGTTCAAACTCCAAAGAGATTGAAGTTCCCTTGGAAGTAGAAAAGGTTGATGATTCATACCTTTCTGCTTTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAATGCTGCCATAGACATGAATCTGTTTGATGTGATAGCAAAGGCAAAGAGTTGTTGTGATGATGCAAGTTTTTCTGCCTCTCAAATTGCCTCTTTGATTCCAAATGAGCACCCTCAATTGGCTAATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTCTTCTGCATTGCTCCATTCGCAGCAATGAAGATGGTTATCTTCTACCGAAACTTGTGAAATTCCGGCCTAATTTCTGCAATTTCATTTTGGGTCCGTATTGCGCTGAAAAAAATTCACACAGGCACTTTCGTATGTTGTTTGCACCCAAGCAAGGAAGCACGTCCATAAACGAATCACAAAAAGAAGATACGGGGAAGAAAAGCCAAGACATTTTGTTTTCGGAAAACCGGTTTTGTTCACTCTCAGTCTGGGACTTACTACGCCTTACTCCTTGGGTATTTTACTCTGAAATTTTTACCAGACATTCTTCACTGTGTCTATTGAGTTTTGGCTGA 612 0.4069 MGSNSKEIEVPLEVEKVDDSYLSALLLCFSNVLPAVLNAAIDMNLFDVIAKAKSCCDDASFSASQIASLIPNEHPQLANRLERMLPLLASYSLLHCSIRSNEDGYLLPKLVKFRPNFCNFILGPYCAEKNSHRHFRMLFAPKQGSTSINESQKEDTGKKSQDILFSENRFCSLSVWDLLRLTPWVFYSEIFTRHSSLCLLSFG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0065 203 SUPERFAMILY "Winged helix" DNA-binding domain 18 104 IPR036390 -
Pvu3g0065 203 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Pvu3g0065 203 PANTHER O-METHYLTRANSFERASE 1 104 IPR016461 GO:0008168
Pvu3g0065 203 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 104 - -
Pvu3g0065 203 Gene3D - 2 113 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0065 Pvu-Chr3 580378 582433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0065 1 99 Monolignol Biosynthesis Gene Families AT5G54160 35.354 1.84e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0065 - - pvu:PHAVU_003G006200g 412.149