Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0064 ATGGGTTCAAACTCCAAAGAGATTGAAGTTCCCTTGGAAGTAGAAAAGGTTGATGATTCATACCTTTCTGCTTTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAATGCTGCCATAGACATGAATCTGTTTGATGTGATAGCAAAGGCAAAGAGTTGTTGTGATGATGCAAGTTTTTCTGCCTCTCAAATTGCCTCTTTGATTCCAAATGAGCACCCTCAATTGGCTAATAGGCTTGAAAGAATGCTGCCATTGTTGGCCAGTTACTCTCTTCTGCATTGCTCCATTCGCAGCAATGAAGATGGTAAGAGAGAAAGAGTTTATGCTCTCTCACCTGTTGGACAATACTTTTCTTATGATGATGAAGGAAACTCTGTGGCTCCACTCTCAACTTTATTTCATCGCGGATTTCATAACCTTTGGAAGGATGCAAAAGGTGCATATCTGGACCCGAATTGCAGTAACCATTTCGAAAGTGTTTATGGAATGCTCCCATTTGAATATATGGAGAAAGATACAAAGTTGAATGAAATGTTTTTCAAAGCAATGGCTCATGCTAGTCCAATAGAAGTTAAAAGGGTAATCAAAGTATATAAAGGATTTGAGGGGTTGTCAACATTGGTTGATGTAGGAGGTGGAATAGGACATACCCTCAAACTCATTCTCTCTACGTACCCTTCAATTAAAGGACTTAATTTTGATTTGCCTCGGACAATTCAAGATGCACCTCCTCATCCAGGTATAGAGCATGTGGGAGGAGATATGTTTGAAAGTGTTCCAAATGGGGATGCCATTTTAGTAAAGCGTGTATGTCACAATTGGGGAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCACCACATGGAAAAGTGATTGTTATGGACTATATAATTCTAGAGGTTCCAAATTCAAGTGATGCATCTAAGCATAGTAGTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTGAGATTGAATTTGAGAACTTGTGCAAGAGCTCTGGTTTTTCTAAGTTTCATGTTGCATGTAGTAGCATATCATCTATAGGAGTGATGGAGTTCTATAAGTAG 1107 0.3884 MGSNSKEIEVPLEVEKVDDSYLSALLLCFSNVLPAVLNAAIDMNLFDVIAKAKSCCDDASFSASQIASLIPNEHPQLANRLERMLPLLASYSLLHCSIRSNEDGKRERVYALSPVGQYFSYDDEGNSVAPLSTLFHRGFHNLWKDAKGAYLDPNCSNHFESVYGMLPFEYMEKDTKLNEMFFKAMAHASPIEVKRVIKVYKGFEGLSTLVDVGGGIGHTLKLILSTYPSIKGLNFDLPRTIQDAPPHPGIEHVGGDMFESVPNGDAILVKRVCHNWGDEDCIKFLRNCHKALPPHGKVIVMDYIILEVPNSSDASKHSSIVDNHMLLAHGGRERTEIEFENLCKSSGFSKFHVACSSISSIGVMEFYK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0064 368 Gene3D - 2 119 IPR036388 -
Pvu3g0064 368 Gene3D Vaccinia Virus protein VP39 121 368 IPR029063 -
Pvu3g0064 368 Pfam Dimerisation domain 36 89 IPR012967 GO:0046983
Pvu3g0064 368 Pfam O-methyltransferase domain 155 349 IPR001077 GO:0008171
Pvu3g0064 368 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 368 - -
Pvu3g0064 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 359 IPR029063 -
Pvu3g0064 368 PIRSF O-mtase 3 368 IPR016461 GO:0008168
Pvu3g0064 368 CDD AdoMet_MTases 208 305 - -
Pvu3g0064 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 368 IPR016461 GO:0008168
Pvu3g0064 368 PANTHER O-METHYLTRANSFERASE 1 368 IPR016461 GO:0008168
Pvu3g0064 368 SUPERFAMILY "Winged helix" DNA-binding domain 18 123 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0064 Pvu-Chr3 574960 577572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0064 1 368 Monolignol Biosynthesis Gene Families AT5G54160 44.474 3.99e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0064 - - gmx:106794104 560.451