Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0063 ATGAGTTCTAACTCCAAAGACAGTGAAGTTTCCTTAGAAGTAGAAAAGTTGGATGATTCATACCGTTCTGCTGTGTTGCTTTGTTTCAGCAATGTTCTTCCTGCAGTTCTAAACGCTGCCATAGACATGAATTTGTTTGATGTCATAGCAAAGGCAAAGAGTTCTTGTGATGATCATTCAAGTTTCTCTGCCTCTGAAATCGCCTCTTTGCTTCCAAATCAGCACCCACAATTGGCTAATAGGCTTCAAAGAATGCTGCCATTGTTGGTCAGTTACTCTCTTCTGCATTGCTCCATTCGCACCAATGAAGATGGTAAGAAAGAAAGAGTTTATGCTCTCTCACCAGTTGGAGAATACTTTGCTTATGATGATGAAGGAATCTCTATGGCTCCACTCTCAACCTTACTTCATCGTGGATTTCATGACCTTTGGAAGGATGCAAAAGGTGCATTTATGGACCCAAATTGCAGTAATCATTTCGAAAGTGTCTATGGAATGCCATCATATCAATATATGGAGAAAGATACAGAGTTGAATGAAATGTTTTTCAAAGCAATGGCTCATGCTGGTCCAATAGAAGTGAAAAAGGTACTCAAAGTATACAAAGGATTTGAGGGGTTGTCTACTCTGGTTGATGTAGGAGGTGGAGTAGGGCAGACCTTGAAACTCATTCTCTCTGCATACCCTTCAATTAAAGGAGTTAACTTTGATTTGCCTCAGACAATTCAAGATGCACCTCCTCATCCAGGTATAGAGCATGTGGCAGGAGATATGTTTGCAAGTGTTCCAAATGGAGATGCCATCTTAGTAAAGTCTATATGTCACAATTGGACAGATGAAGATTGTATAAAATTTTTAAGAAACTGTCACAAAGCTTTGCCAGCACATGGAAAAGTGATTGTTATGGACTATATAATTCAAGAGGTTCCGAATTCAAGTGATGCATCTAAACATAGTAGTATTGTGGACAATCACATGCTTTTAGCACATGGAGGGAGGGAAAGAACTGAGATTGAATTTGAGAACTTGTGCAAGAACTCTGGCTTTTCCAAGTTTCATGTTGCATGTACTAGCATATCAGCTGTGGGAGTGATGGAGTTCTATAAATAG 1110 0.3946 MSSNSKDSEVSLEVEKLDDSYRSAVLLCFSNVLPAVLNAAIDMNLFDVIAKAKSSCDDHSSFSASEIASLLPNQHPQLANRLQRMLPLLVSYSLLHCSIRTNEDGKKERVYALSPVGEYFAYDDEGISMAPLSTLLHRGFHDLWKDAKGAFMDPNCSNHFESVYGMPSYQYMEKDTELNEMFFKAMAHAGPIEVKKVLKVYKGFEGLSTLVDVGGGVGQTLKLILSAYPSIKGVNFDLPQTIQDAPPHPGIEHVAGDMFASVPNGDAILVKSICHNWTDEDCIKFLRNCHKALPAHGKVIVMDYIIQEVPNSSDASKHSSIVDNHMLLAHGGRERTEIEFENLCKNSGFSKFHVACTSISAVGVMEFYK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0063 369 PANTHER O-METHYLTRANSFERASE 1 369 IPR016461 GO:0008168
Pvu3g0063 369 SUPERFAMILY "Winged helix" DNA-binding domain 18 124 IPR036390 -
Pvu3g0063 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 369 IPR016461 GO:0008168
Pvu3g0063 369 PIRSF O-mtase 2 369 IPR016461 GO:0008168
Pvu3g0063 369 Pfam O-methyltransferase domain 144 350 IPR001077 GO:0008171
Pvu3g0063 369 Gene3D - 1 120 IPR036388 -
Pvu3g0063 369 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 369 - -
Pvu3g0063 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 365 IPR029063 -
Pvu3g0063 369 CDD AdoMet_MTases 209 306 - -
Pvu3g0063 369 Gene3D Vaccinia Virus protein VP39 123 369 IPR029063 -
Pvu3g0063 369 Pfam Dimerisation domain 36 90 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0063 Pvu-Chr3 570571 572870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0063 18 369 Monolignol Biosynthesis Gene Families AT5G54160 45.070 2.15e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0063 - - gmx:106794104 565.074