Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0055 ATGTGGGAGCAAAGTGTGAGCATGTCCACAATTGATGCCAATATAAATTCAAATGAAATTGCTGGTCAACTCAGTTATGTAGCTGGGTCCTTGGTTTGGGTAGAGGACCCTGAGTCAGCTTGGATAGATGGAGAAATCCAGGATTCTAAGAAAGATGACATCACCATTATCTTTGAATCAGGAACCAGGGTTGTGAGCAAATCGGCTAACATGTATCCCAAAGATCCAGAATTCCCACCTAATGGTGTGGAAGATATGACAAGACTGGCATATCTGCATGAACCAGGAGTTCTTCAGAATTTGAAAGTTCGATATTCCGAAAATGAAATTTATACATACACGGGAAATATATTGATAGCTGTGAACCCTTTTCAAAGGTTACCTCATTTGTCTGAAACTAGTACCATGGCAAAGTATAAAGGTGCAGCTTTTGGTGAGCAGAGCCCGCATCCTTTTGCAATTGCAAGTTCTGCATATAGCAAAATGATAAACGAAGAAAGAAGCCAATCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGAAAAACTGAGAGTACAAAGATGCTTATGCATTATCTTGCTTTTTTGGGAGGCAGAGCAGCAACTGAAGGACGGTCTGTGGAGCAACAAGTTCTCGAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACAGTAAGGAATAATAATTCTAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACATATTTGCTGGAACGATCCCGTGTTTGTCAAGTTTCTGATCCTGAGAGAAACTATCATTGCTTTTATATGCTTTGTGCTGCACCAAAAGAGGATTCTGGAAAATACAAATTGGGAGATCCAAGAAAATTCCATTACCTTAATCAATCAAATTGCATTGAGCTGGATGGGCTGGATGATTCTAAGGAGTACCTTGCAACTAAGAGAGCCATGGAGGTTGTTGGGATCAGCTCAGATGAGCAGGATGCTATATTTCGAATAGTAGCCGCAGTACTTCATTTAGGAAACATTGAGTTTATTAAGGGAGCAGAAGAGGAGTTAGATTCCTCTCAGCCCAAGGATGAAAAATCCTTTTACCACCTAAAAATAGCAGCAGAACTTTTGATGTGTGATGAGAAGTCCCTCGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGACACCATAACAAAATCCCTTGATCCAAATTCTGCAGCTCTCAGTAGAGATGCATTGGCAAAAATTGTTTATTCAAGGCTTTTTGACTGGATTGTGTGCAAGATAAACAACACCATTGGGCAAGATCCAGAATCAAATAAATTGATCGGAGTTCTTGATATATATGGATTTGAGAGTTTCAAAACCAACAGCTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATCGATTGGAGTTATATTGAGTTCGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGAAACCTGGTGGTGTTATTGCTCTCCTGGATGAGGCCTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTATACCAAACCTTTAGAGACAACAAACGCTTCAGCAAGCCAAAGTTGTCTCGCACTGATTTCACCATTAACCACTATGCCGGTGATGTCACTTATCAAACTGACTTTTTCCTTGATAAAAATAAAGACTATGTTGTTCCGGAGCATGCTGCTCTACTCAGTGCTTCCAAGTGCCCATTTGTTTCAGGGTTGTTTCCACCTTTACCCGAGGAAACTACAAAATCAACAAAGTTCTCTTCTATAGCCACTCAGTTTAAGCTGCAACTTCAATCTTTGCTTGAAACACTAAACGCTACCGAGCCTCACTATATTCGTTGTGTAAAGCCAAATAATCTTCTGAAGCCAGGGATATTCGAGAACAGTAATGTGTTGCAGCAGCTTCGATGTGGAGGAGTAATGGAGGCGATTCGGATAAGTTGTGCCGGATATCCCACTAGAAAGAACTTTGATGAATTTGTTCAGCGGTTTACCATCCTGGAACCTTTGGTTCTGAAAGCATGCCCTGATGAGATGACTGCATGCAAGAGGCTTCTAGATAGAGCAAGCCTTAAAGACTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGCATGTCGTGCTGAGGTCTTGGGAAAGTCTGCAAGTGTTATTCAGAGAAAAGTCCGCACGTTTCTCTGTCGAAAACGATACGTCATATTGCAGTTGTCTGCCATAGAACTTCAAAGGGTTGCGAAAGGACAACTTGCACGACATCAGTTTGAATGCTTGAGGAGGGAAGCCGCTTCTATGAAAATTCAGAAAGATTTCCGCATGTATATTTCCAGAAATGCTTATAAAACTACATATGCCTCAGCTATTTGTATTCAAACTGGTATGCGAGGGATGGCTGCTAGAAATGATCTTAGATTCAGGAGACGGACAAAAGCTGCAATTATTATTCAGGGTCGATACAGATGTCATTCGGCTAGTACTTATTTCCGGAAGCTAAAGAAAGCAGCAATCTTTGCACAGTGTTCCTGGAGGAGAACAATAGCACGGAGAGAACTTCGAAAGCTTAAAATGGCTGCCAAGGAAGCTAAGGTACTTGAAGAGGCAAAAAACAATCTGGAAAAGCAAGTCAAAGAATTAACTTCATGTCTAGAAGAAGAAAAGACAATGAGGGAAGCCAAGACACGGGAAAATGAAAAACTACAAAATGCTTTGCAAGAGAAGGAGCTTCAATTCCAAGAACTTAAGGAAGTCAAGGAAAAGGAAACTGAAAAACTGCAGCATGATTTGAAAGAGATGGAGCTTCAGTTCGAAGAAATTAAGGAAGCCAAGATACAGGAAACTGAAAAACTACAATGTGCTTTGAAAGAGATGGAGCTTCAGTTCCAAGAAACTAAGGAAGCACTCATTCAGGAACAAGAAGCTAAGGAAGCACTCATTCAGGAACATGAAGCTGCCATGAAAGTAGCTGAGCAAACTCCAAGTATACAGGAGAATTCTGTTAATGATGTTGACAATGAATTGGTCAATAAGCTTACAGCAGAAAATGATCAACTCAAGGGTCAGGTTAGTTCATTGGAAATAAAAATTGATGAAACAGAGAGGAAATATGAAGAAACTAACAGGATTAGTGAGGATCGCATGAGTCAGATTATAGAGACAGAATCAAAGATGATTGAGATAAAGACAAATATGCAGAGACTTGAAGAAAAAGTATCCGACATGGAAACTGAGAATCAAGTTTTGAGGCAGCAAACCTTGTTGAGTTCATCATCCAGAAGAATGTCAGGAAAGTTTTCACCGGGTGCAGTTCCGGAGAGTGTAGATATTCTTTTCAAATGTGTGACAAAAGATCTTGGGTTCTCTGAAGGAAAACCTGTTGCAGCATTTACCCTTTATAATTGTCTGCTACATTGGAAATCTTTTGAAGCAGAAAAAACAAGCATATTTGATCGTCTTATTCAGATTATTGGTTCTGAAATAGAGGATCCTGACAAAAATGATTGTATGGCTTATTGGCTATCCAACACATCTTGTTTATTTTTCCATCTTCATCGATGTCTAAGAGTACCTACAGCACGGAAACCACCCACTCCGACATCATTTTTTGGGAGGATGGCCCAGGGTTTCCGCTCATCTAATAGTCTTTCCAGCAGTGCTTTTGATGTAGTGCATCAGGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAACAGCTTGCAGCTTATGTGGAAAAGATATATGGAATCGTTCGAGAAAATTTTAAGACAGACTTGTTACCTGTGCTTTCTTCTTGCATTAAGGCAGATAGAGCATCAGATGAAAACAGCCAACAAGCTGGTTCTTGGCTCAGCATTATGGAATGCCTTAATAAATATCTCAAGATTTTGAAAGAAAACTATGTGCCTACTGTTCTAGTTCAGAAGCTATTCAATCAAGTTTTTCAATACATAAATGTGGAACTCTTTAATAGCATTCTTTTGCATGAAGAATGCTGCACATTCAAACATGGAGAATATTTAAAATCAGGGTTGGCTGAACTAGAACAATGGTGTACTGAAGCAACGGAGGAGTACATTGGCTCATCTTGGGATGAACTCAAACATGCATCACAAGCAGTTAGATTCTTGGTTGCAGAAAAGAAAGATGAGCTATCTTATGATGATCTTACAAATGACATATGCCCTGTCCTGAGTGCTCAACAACTTACTAGAATATGTACACTTTACTCTGATGAAGATGATGACAAAAAACAAAGTGTATCAACAGATGTCACTACTAGATTGAAGCTTCTAATGACAGATGATGAAGATGAAGGTAGTAAAACCTACTCGCTGGAGGACAACACAAGTCATCCTATTATAGTTGAAGAGATCCCTGCTTCTTCTCAAGATAAGAACATTCCAAAAGTAAAACCTCCTGATGAACTTCTTGAGAATGCAAACTTCCAATTTCTCCATGACTATTGCTAG 4599 0.396 MWEQSVSMSTIDANINSNEIAGQLSYVAGSLVWVEDPESAWIDGEIQDSKKDDITIIFESGTRVVSKSANMYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLKVRYSENEIYTYTGNILIAVNPFQRLPHLSETSTMAKYKGAAFGEQSPHPFAIASSAYSKMINEERSQSILVSGESGAGKTESTKMLMHYLAFLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDSGKYKLGDPRKFHYLNQSNCIELDGLDDSKEYLATKRAMEVVGISSDEQDAIFRIVAAVLHLGNIEFIKGAEEELDSSQPKDEKSFYHLKIAAELLMCDEKSLEDSFCKRVMVTRGDTITKSLDPNSAALSRDALAKIVYSRLFDWIVCKINNTIGQDPESNKLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTFRDNKRFSKPKLSRTDFTINHYAGDVTYQTDFFLDKNKDYVVPEHAALLSASKCPFVSGLFPPLPEETTKSTKFSSIATQFKLQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENSNVLQQLRCGGVMEAIRISCAGYPTRKNFDEFVQRFTILEPLVLKACPDEMTACKRLLDRASLKDYQIGKTKVFLRAGQMAELDACRAEVLGKSASVIQRKVRTFLCRKRYVILQLSAIELQRVAKGQLARHQFECLRREAASMKIQKDFRMYISRNAYKTTYASAICIQTGMRGMAARNDLRFRRRTKAAIIIQGRYRCHSASTYFRKLKKAAIFAQCSWRRTIARRELRKLKMAAKEAKVLEEAKNNLEKQVKELTSCLEEEKTMREAKTRENEKLQNALQEKELQFQELKEVKEKETEKLQHDLKEMELQFEEIKEAKIQETEKLQCALKEMELQFQETKEALIQEQEAKEALIQEHEAAMKVAEQTPSIQENSVNDVDNELVNKLTAENDQLKGQVSSLEIKIDETERKYEETNRISEDRMSQIIETESKMIEIKTNMQRLEEKVSDMETENQVLRQQTLLSSSSRRMSGKFSPGAVPESVDILFKCVTKDLGFSEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQIIGSEIEDPDKNDCMAYWLSNTSCLFFHLHRCLRVPTARKPPTPTSFFGRMAQGFRSSNSLSSSAFDVVHQVDAKYPALLFKQQLAAYVEKIYGIVRENFKTDLLPVLSSCIKADRASDENSQQAGSWLSIMECLNKYLKILKENYVPTVLVQKLFNQVFQYINVELFNSILLHEECCTFKHGEYLKSGLAELEQWCTEATEEYIGSSWDELKHASQAVRFLVAEKKDELSYDDLTNDICPVLSAQQLTRICTLYSDEDDDKKQSVSTDVTTRLKLLMTDDEDEGSKTYSLEDNTSHPIIVEEIPASSQDKNIPKVKPPDELLENANFQFLHDYC* 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0055 1532 Coils Coil 891 1035 - -
Pvu3g0055 1532 SMART DIL_2 1351 1458 IPR002710 -
Pvu3g0055 1532 ProSiteProfiles Myosin motor domain profile. 81 753 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 Pfam DIL domain 1352 1455 IPR002710 -
Pvu3g0055 1532 Pfam Myosin head (motor domain) 83 741 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 Coils Coil 1051 1085 - -
Pvu3g0055 1532 SMART iq_5 755 777 IPR000048 GO:0005515
Pvu3g0055 1532 SMART iq_5 778 800 IPR000048 GO:0005515
Pvu3g0055 1532 SMART iq_5 803 825 IPR000048 GO:0005515
Pvu3g0055 1532 SMART iq_5 851 873 IPR000048 GO:0005515
Pvu3g0055 1532 SMART iq_5 874 896 IPR000048 GO:0005515
Pvu3g0055 1532 SMART iq_5 826 848 IPR000048 GO:0005515
Pvu3g0055 1532 ProSiteProfiles IQ motif profile. 852 878 IPR000048 GO:0005515
Pvu3g0055 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 806 IPR027417 -
Pvu3g0055 1532 PRINTS Myosin heavy chain signature 111 130 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 PRINTS Myosin heavy chain signature 168 193 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 PRINTS Myosin heavy chain signature 215 242 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 PRINTS Myosin heavy chain signature 450 478 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 PRINTS Myosin heavy chain signature 503 531 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 PANTHER MYOSIN HEAVY CHAIN 1040 1529 - -
Pvu3g0055 1532 PANTHER MYOSIN HEAVY CHAIN 24 951 - -
Pvu3g0055 1532 Coils Coil 1093 1127 - -
Pvu3g0055 1532 ProSiteProfiles IQ motif profile. 875 904 IPR000048 GO:0005515
Pvu3g0055 1532 Pfam Myosin N-terminal SH3-like domain 28 67 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 CDD MYSc_Myo11 95 741 IPR036018 -
Pvu3g0055 1532 CDD MyosinXI_CBD 1148 1499 IPR037975 GO:0007015
Pvu3g0055 1532 ProSiteProfiles IQ motif profile. 804 830 IPR000048 GO:0005515
Pvu3g0055 1532 Gene3D - 688 751 - -
Pvu3g0055 1532 PANTHER MYOSIN 1040 1529 - -
Pvu3g0055 1532 PANTHER MYOSIN 24 951 - -
Pvu3g0055 1532 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 27 76 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 Gene3D - 460 644 - -
Pvu3g0055 1532 Pfam IQ calmodulin-binding motif 806 825 IPR000048 GO:0005515
Pvu3g0055 1532 Pfam IQ calmodulin-binding motif 758 776 IPR000048 GO:0005515
Pvu3g0055 1532 Gene3D Kinesin motor domain 84 683 IPR036961 -
Pvu3g0055 1532 ProSiteProfiles IQ motif profile. 829 856 IPR000048 GO:0005515
Pvu3g0055 1532 ProSiteProfiles Dilute domain profile. 1193 1477 IPR002710 -
Pvu3g0055 1532 Gene3D - 755 806 - -
Pvu3g0055 1532 Gene3D - 854 903 - -
Pvu3g0055 1532 Gene3D - 807 853 - -
Pvu3g0055 1532 SMART MYSc_2a 75 754 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0055 1532 Gene3D - 271 329 - -
Pvu3g0055 1532 Gene3D Myosin VI head, motor domain, U50 subdomain 331 622 - -
Pvu3g0055 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 806 903 IPR027417 -
Pvu3g0055 1532 ProSiteProfiles IQ motif profile. 779 808 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0055 Pvu-Chr3 471494 488280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0055 18 1529 Myosins gene family AT5G43900 58.312 0.0 1813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0055 K10357 - gmx:100788123 2417.5