Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0043 ATGAAACTTTCTTTCTCTGTCCCTTCGTCGAAACCCCAATCGAAGCCCAAACCAGTCAATTCCTTCGACGACACTTCCGCAGCTCAAAACGACGCCGCTGGATCCAAACACCTCATCACCGAATTCGATCCTTCCAAACCCGCTCCCTCCCTCGCCCCCAAAACCCTAATTCCACCAATCCAAAACCAATGGAAACCCTTCAAAAAGATGAAGAACCTCCACCTCCCCACCGCCGACCCCGAATCCGAAGCCCTCACATTCGAACTCCACGCCGCCGACGACCAACCCGACTCCGACGTCTCCTACGGCCTCAACCTCCGCGCCGACAAAAAAAGTGAGCAGAACAATGGTACCGCACTTCCGCCGCCGCCGCCGCGCCGCGTTCCGGCAGAGAGCACTATGCTGCAGAAGCTGAAGGACGACTTGCTGAGGCTACCGGAGGACAACGGGTTCGACGAATTCAAGGATGTCCCCGTCGAGGGTTTTGGCGCTGCGCTGCTGGCCGGGTACGGGTGGAAGGAAGGGATGGGGATTGGGAAGAACGCGAAGGAGGACGTGAAGGTTGTGGAGATCAAGCGGAGAACTGCCAAGGAAGGATTGGGGTTTGTTGGTGATGCTCCTGCTGCGCTGGTTCGTAGCAATAATGACAAGGACAACAAGGACAAGGAGAAGAATGAGAAGAAGGAGAAGGTTGTTAGGATTGTTGGGGGAAGAGATGCTGGGCTGAAGGGTAGTGTTGTGTCTAGGATTGGGGATGATTATCTTGTTTTGGAGCTATCCAGGAGTGGAGAGAAGGTGAAGGTGAAGGTGGGCGATGTTGCTGAATTGGGTTCTAAGGAGGAAGAGAGGTGTCTGAGGAAATTGAAGGAGTCGAAGACTCAGCGTGAGGATAGAGGGCCGAAGAGGAAGCACGAGAGGGATGAGGTGGAGGAGAATGGAGTGGATGTTAGTCGGAGAGAGGAGAGGAAAGGGGTGGGTCGCAGGGATGTGGTTGAGAAGAGAACGAATGGTGGTAGGAGAGAGGAGAGGAGAGTGGTGGATCATAGGAAGGTTTCTTGGCTTACTAGTCACATTCGGGTGAGGGTGATTAGCAGGGATTTGAAAGGAGGGCTATTGTATTTGAAGAAGGGGGAGGTTCTGGATGTTGTTGGGCCTACCACTTGTGATGTATCTATGGATGAAAGCAGGGAGATTGTTCAAGGGGTGTCCCAAGATTTTCTGGAGACGGCTATTCCGAAACGTGGGGGACCTGTGCTTGTGTTGGCTGGTAAATACAAGGGTGTATTTGGGAGTCTGGTGGAGAGAGATTTGGACCGGGAAATGGCCATTGTTAGGGATGCTGATACCCATGAGCTGCTCAATGTGAAGCTTGAACAAATTGCGGAGTATATGGGGGACCCAAGCTTATTGGGACATTGA 1419 0.5292 MKLSFSVPSSKPQSKPKPVNSFDDTSAAQNDAAGSKHLITEFDPSKPAPSLAPKTLIPPIQNQWKPFKKMKNLHLPTADPESEALTFELHAADDQPDSDVSYGLNLRADKKSEQNNGTALPPPPPRRVPAESTMLQKLKDDLLRLPEDNGFDEFKDVPVEGFGAALLAGYGWKEGMGIGKNAKEDVKVVEIKRRTAKEGLGFVGDAPAALVRSNNDKDNKDKEKNEKKEKVVRIVGGRDAGLKGSVVSRIGDDYLVLELSRSGEKVKVKVGDVAELGSKEEERCLRKLKESKTQREDRGPKRKHERDEVEENGVDVSRREERKGVGRRDVVEKRTNGGRREERRVVDHRKVSWLTSHIRVRVISRDLKGGLLYLKKGEVLDVVGPTTCDVSMDESREIVQGVSQDFLETAIPKRGGPVLVLAGKYKGVFGSLVERDLDREMAIVRDADTHELLNVKLEQIAEYMGDPSLLGH* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0043 472 Pfam G-patch domain 146 202 IPR026822 -
Pvu3g0043 472 Coils Coil 210 230 - -
Pvu3g0043 472 ProSiteProfiles G-patch domain profile. 159 205 IPR000467 GO:0003676
Pvu3g0043 472 PANTHER G PATCH AND KOW-CONTAINING 1 470 IPR045166 GO:0000398
Pvu3g0043 472 SMART kow_9 411 438 IPR005824 -
Pvu3g0043 472 SMART kow_9 225 252 IPR005824 -
Pvu3g0043 472 MobiDBLite consensus disorder prediction 1 63 - -
Pvu3g0043 472 SMART G-patch_5 157 203 IPR000467 GO:0003676
Pvu3g0043 472 MobiDBLite consensus disorder prediction 287 338 - -
Pvu3g0043 472 MobiDBLite consensus disorder prediction 1 33 - -
Pvu3g0043 472 Gene3D - 357 411 - -
Pvu3g0043 472 MobiDBLite consensus disorder prediction 87 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0043 Pvu-Chr3 371108 374756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0043 348 445 C2H2 Transcription Factor Family AT1G55460 32.653 2.61e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0043 K13101 - gmx:100784983 661.373