Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0039 ATGTGGAAGCCCGTTTTGGTGATGATTATTGTTAACTTAGCTTGGGCTTTTGTGAATATATTTCTTAAGAAAGTTCTTAATGAAGGAGGAGACTACTTCACCATCTTAACTTATCGACAAGCTATTTCAGCCATTTTCTTGGCACCTATTGCTTGCTTCCATGAAAGGAAAAGGAAGGTGGAGGGTCACATAATATGTCTGCTTTTCATAAGTGCTCTTGTGGGGGTTACATTGACTCAATACCTGTTTCTTATGGGACTGGAATATACATCTGCAACCTTCTCATGTGCATTTCTAAATATGGTGCCTGCATTTACCTTTATTATGGCACTGCCATTGGGGATAGAGAAGGTAAACATGAAAAAACTGAGTGCTAAGGCCAAAGTGTTGGGAACTTTTGTGTGCATTGGTGGAACTTTGATGTTGATCCTTTACAAAGGAATGCCCTTAATCAACCAACAACAAGAGCACATAGCAGACAAAGGCACAACAACACCATCAGCTTCCAAGTTAAAGATATGGATAATAGGTTCACTGCTTCTCACTGCAGGATGTGTCTTGTGGTCTTCATGGTTTCTTATACAAGCAAGGATTAGCAAAGAGTATCCATGTCAGTACTCTAGCACAGCTATTTTGTCCTTTTTTGCTGCCATTCAATCTGCAATATTAACTTTGGTCATTGATACAAATAAGACCAAATGGATTCTCAAAGGGAAGTTAGAGATTCTCACTGTTGTGTATTCTGGACTGGTTGGATCAGGCTTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAGGGGTCCAGTTTTCACTTCAGCATTTACCCCTCTTCTGCAGATGTTTGTAGCAGTGCTTGATTTCTCTATATTACAAGAGGAAATTTATCTGGGAAGTGTTGCAGGATCAGTCTTGGTTATTTCTGGCACTTATATTCTACTTTGGGGTAAAAGTAAAGAGGAAGAACAAAATGCCAAGAAGGATACTCAAGAAGATGAAGAATGTATGAATAATTTTGAGGCCAATCCAAATGCAGACTCTAAGCAGAGGCTTAATGGAGAACAAGGATTATCTGAATTACAAGTGAAGCAGTTGGCCATTACAGTAACTAGAAGTTGA 1119 0.3923 MWKPVLVMIIVNLAWAFVNIFLKKVLNEGGDYFTILTYRQAISAIFLAPIACFHERKRKVEGHIICLLFISALVGVTLTQYLFLMGLEYTSATFSCAFLNMVPAFTFIMALPLGIEKVNMKKLSAKAKVLGTFVCIGGTLMLILYKGMPLINQQQEHIADKGTTTPSASKLKIWIIGSLLLTAGCVLWSSWFLIQARISKEYPCQYSSTAILSFFAAIQSAILTLVIDTNKTKWILKGKLEILTVVYSGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILQEEIYLGSVAGSVLVISGTYILLWGKSKEEEQNAKKDTQEDEECMNNFEANPNADSKQRLNGEQGLSELQVKQLAITVTRS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0039 372 Pfam EamA-like transporter family 3 143 IPR000620 GO:0016020|GO:0016021
Pvu3g0039 372 Pfam EamA-like transporter family 176 314 IPR000620 GO:0016020|GO:0016021
Pvu3g0039 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 319 - -
Pvu3g0039 372 PANTHER WAT1-RELATED PROTEIN 5 336 IPR030184 GO:0016021|GO:0022857
Pvu3g0039 372 PANTHER WAT1-RELATED PROTEIN 5 336 - -
Pvu3g0039 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 38 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0039 Pvu-Chr3 341198 344678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0039 2 322 Nodulin-like Gene Family AT1G11460 40.741 4.06e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0039 - - gmx:100794199 638.262