Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0036 ATGAATAATGAGGTGTTGGAGGAAGGAGAGGTGGGAAGAGAAGAGTGGATAATGAAACGTAGGTGCGTGGAGATAAGAAAACAAGAAAGAAAGAAAGTTGAAGAGTCTAAGGAAGAGTACGGAAATCTCCACCATCTCCTGTTTCTGCCTCAATCATTACTCTCTCCTTCATTTCACTTCTCATCGCTTCTCATTCTTCTTTTTTTCCTCCTTCTCTCGCGCCGCAACCAAACACGCCCTAATCCAATTCCAACCATCATGTCCAACTCTGACGGCCCCACTAACGGCGTCACCACTAGCGACGCCAACGCACTCGCCGACTCGCACCAGCGACCCGCCGCCGCCACCACGCTCGCCGTTAAGAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGTCGGGGGCGGCGTATTCGCATGCCGATCATATGCGCGGCGCGCGTCTTCCAGCTCACGCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATAGCCGCCACCGGAACCGGCACCACACCGGCCACGTTCTCCACCGTCTCCGATCACAAGCCACTCCTCCCTGCCCCCACGCCTTTCATCCTCGGCAAGCGCATTCGCCCCGACGACACCGACGCCGTTTCCAAGGACGACGCCGTTTCGCTCGTCGCGCCGCCCACGCCGCCCGCGCTCTGGGCGCTCCCGCCGCGCCCTGATTTCAGCCAGGTATGGAGCTTCGCGGCCGCTGCCGCGGCCGCAGCGCCGCCGGAACTCGTGTCCGTCTCGTCGCAGAACTCCCTGTTCCACCACCACCAACACCAGCACCGTCACCAGCAACAACAAGCCGCAATGGGAGAAGCCTCCGCGGCGAGGCTCGGGAATTACCTCCCCGGCCACCTCAATTTGCTCGCCTCGTTGTCCGGAGGCCATGGAAATTCCGGCCGGCGGGACGAGGAGCCTCGTTGA 981 0.6126 MNNEVLEEGEVGREEWIMKRRCVEIRKQERKKVEESKEEYGNLHHLLFLPQSLLSPSFHFSSLLILLFFLLLSRRNQTRPNPIPTIMSNSDGPTNGVTTSDANALADSHQRPAAATTLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSTVSDHKPLLPAPTPFILGKRIRPDDTDAVSKDDAVSLVAPPTPPALWALPPRPDFSQVWSFAAAAAAAAPPELVSVSSQNSLFHHHQHQHRHQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDEEPR* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0036 326 MobiDBLite consensus disorder prediction 273 292 - -
Pvu3g0036 326 Pfam TCP family transcription factor 125 196 IPR017887 -
Pvu3g0036 326 MobiDBLite consensus disorder prediction 106 134 - -
Pvu3g0036 326 ProSiteProfiles TCP domain profile. 125 179 IPR017887 -
Pvu3g0036 326 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 87 323 IPR005333 GO:0003700
Pvu3g0036 326 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 87 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0036 Pvu-Chr3 318714 325742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0036 95 326 TCP Transcription Factor Family AT5G23280 60.156 2.12e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pvu3g0036 TCP 3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0036 K16221 - gmx:100795254 361.303