Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0033 ATGGAGTGCATCTTGGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGTTGCTTTAACAATTTCGTAAAAAAGCTTGAAGAAGAAGAGGGCGATTTGATTGTAACGAGAGATAGTGTCCAAATATTTGTTACCAATGCCAAGAAACAAACGAGAAAGATCAGTGAAGTTGTTGACAAGTGGCTGCAAGATGCTATCAATGACGTAGACAATGTGAATCAGTTGCTGGAAGAGGCAAAAGCAAAAAAAATATGTTGCTTTGGGCACTGTCCGAATTGGATTTGGCAATACCGTGTAGGAAAAAAGTTAGCAAATAAAAATGTGTACCTTGAAAAGTTCATCGAAGAGGGTAAAAAATATGTGCCATTTGATCACATTGCTTCACTTCCTTCAGGCACTGTTCATATTCTCTCAGAAAAATGCATGGATTTTGAGAGTAGACAATGTGCATATGAGCAACTACTGGAAGCAGTGAAAAACAATGATGTTGCCATGATTGGATTGTACGGGATGGGGGGTTGTGGTAAAACCACATTAGTAATGGAGGTTAGGAAGTTAGTAGAAGCAGAGTTTGACAAAGTTCTTTTTGTGCCTATTTCAAGTACAGTGGAAGTTCGAAGCATCCAAAAAGGAATTGCAAGTTCACTGCAATATAAATTTCCAGAAACTGAAGTAATGGAGAGGGCCCAACGATTGTGGTCGAGATTAAAACAAGAGAAAAAAATTCTTGTGATTCTAGATGATGTGTGGGAGAAGCTTGACTTTGATGCCATTGGGATTCCCTCCTCTGAACACCATAAAGGCTGCAAGATTCTCATAACCACTAGATCAGAAGAGGTTTGTACTTCAATGGATTGTCAAAGAAAGATTTACCTGCAAATTTTAACGGATGAAGAAGCGTGGACTCTTTTCCAAAAGAAAGCACTTATATCTGAAGGCACCTCTGATGCCTTAAAGGATTTGGGAAGATTAATTTCCAATGAATGTAAAGGATTACCTGTTGCAATTGCAGCTGTTGCTAGTAGTTTGAAGGGAAAGGCTCTACCGATATGGAGTAATGCATTGAATAAGTTGAGAAGTTCTGAGCCAATAAATATTGAAAGAGGTTTGATTGATCCCTACAAGTGCTTGCAGCTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTCCTATTGTGTGCTGTGTTCCCTGAAGATTATGAAATTCCAGTTGAAGTTTTAACTAGATATGCTATAGGATTAGGTGTAGTTGGAGAAACACAATCTTATGAGGAGGCAAGGAATGAAGTGTTTGCAGCAAGATTTAAGCTCGTTAGTTCTTGTTTATTGTTGGATAAAAAGAATGAAGAGGGTGAATATGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCAAAGAATGAGAACAATATCATCAAGTGCGAAGTGAAAAAAGATGTGATTGTCGAACAAAATTCAGTAAGATATCTATGGTGTGAGAAATTTCCAAATGATTTGGATTGTTCCATTCTTGAGTTTTTATTCTTAAAGACAAAACTAGAAGAATTGGATGGAATTTTCAAAAGAATGGGAAGGCTCAAAGTTTTGATGCTAGTCAATGATAAGGATGGAAAAACACCATTGTCAACAATGTCTTTAAAAACATTAACAAATCTTCGTTGTCTAGTTATTTCTCATTATGAATTGAGTGACTTCTCATTTGTAAGCGATATGAAGAAACTTCAAAGTCTTTCACTGCGTGGTTGTGCATTGCCTTCATTTCCTGAATTACAAACCAATGTTGCAACCTTAAAATTGTTAGAGTTGTACAAATGTTACATAAAAGGGAAGAAGTTTGAAGTGATAAAAAGAACCCATCTACTAGAAGAGTTGTACATTGTCGATATTGAAGGAGAATGGGATGCTAACAATGAAGACAATATTGAATTCTTTAACATGTTTAGTGTTCCCCAAACACTGCAAAGGTATGCAATTGTATTAGGATCCCGTAATTTTGATAATTGTATTTATAAAGAATTTAGCTCTCATCACAATACTTTATTACTTGACTATTTTGACATATCAAATGAGGTAGTTAAGAGTTTGGCAAAAAGAGCAAATGATCTATTTATAGCCAACATTAAGGGAGACGCAAAAAATATCATCCCAGATATATATCAAATTGAAGGAGGAGGTTTGGATGAGCTCATTAAGTTTGATATACGTAATTCTGAAGAGATAGAGTGTTTGATTGACACAAGTAACCATTCGAGTAAGGTGGTAACTCTCTTTTCCAAGTTGTATAAGATCAGAATGAAAAACATGAAAAATTTAAGAGCTTTATGGCATTGTTTTCAACCTGCCAATGGGCCTTTTGAGAACTTAAAGATGTTGTATTTAAGTGGTTGTCCACGGTTGACATCTCTCTTCACATATGTCGTTGCTCAACATTTGGTACAATTGAAAATCTTAAATATAACAAGATGTGATGGATTGAAGCATATATTAGTAGATGATGAGAAAACGGAGAAAAGTCAAGGTGAATTCACCACTGGACATCCTGTACAAATCTTCCAAAATCTTCAGGAAGTAGAGGTAAATAGATGTAGAGAATTAAAAGATATATTCTCGACCAGTGTTTTAAGAGGCTTAGCTCAATTGAAAGTGCTCAAGATAGAAGAATGCAACATGTTAGATCAAATATTTGGGGATATTGATCCATTAACATACCAGGATAAAAAAGAAGAACTTGTTGAAATCGTTGAGGAAGGAACTTTATCAAGCCTTGCAAGCCTTACGATAATCGATTGTCCGAAGTTAGGCTCAATTTTTACAGCATCTATAGCTAAGACCTTGACTTTTTTGGAAGTGTTGATCATAAAAAGGTGCAATAGTTTGAAGCATATAGTAACTCATGAAAGGATCAATCAACAGAAGGAAAACATTGTCGAGGATGACCATGACTTTCAGAGTGATATTTCAAACTTCCAGAGTTTGAAAACGCTATATATCAGGGAATGTGACTTGTTGCAATCTAATCAGGATTGTGAGGAGATTCATATTCATTTCTCAGCATTGGAAATGCTCGCTCTTTATAATCTACCAAATTTTGTTAGCATTTGTGCTACCAACAATCTCACCGTGACGTGGTCATCTTTGAAGGAGTTTACTTGTTATAAATGTTCCTATCCGTTTTATAATTCTATTAATTGCTTGACGGCTCCTGCAGATTCAAGAGAACCTATCAACGCAAGTAAGAAGGATCCAAAAGGGGTTCATAACCCTCTTCTCACTTTGCAAAATATATCTGTAACCAATTCTGAAGTAGAAGGTATTTTTTGTCTTAATGGAGATGGAATGATTGGGCAACAAGTGAGCTTAAGGTTAGAGCGTTTGAAATTGGAAAATATACCTCAAATGACTTATATTTGGGTGGCTTCCAAGAATTCAGTTAATCTCCAACATCTTACTACATTAAAAATAATAGGATGTGCAAAATTGAAAGTAATATTTCCTCCCTCTGTTTTAAGAAGCTTACCAGAGTTGAAAGAGCTAATAATAAAAGAATGCATGGAATTGAAGCAGATTGTTGGATGTGAACAAGGAGCTCCAAACAATTCTCTTATCTTCTCAAATCTTCAAAAATTAGAATTTATTGGATGTGCAAAATTGGAAGTAATCTTTTCAAAGTATGATTTAAGATGCCTACCAATGTTGAGTATTGTGAAGATAAGAAAATGCAAAGAATTAAGAGTAATCATTGAAGAGGATGTGGAGGATAACAAATTGTCTAATCTTCTTTCTCCTCAGGCATTCTTCCCAAAACTAGAAGCATTGTATGTTGGACATTGCCACAAACTCAAAAGATTTATCTCTGGATCTGCATCTAATGACTTTCCTAATCTTTATCTTTTAATCATAAGTGGAGCCTCTGAACTAGAAGAGTTTGTTGGACGTGGACAAGGAAAAAGTGATGAGATAGGAAAGACAAAAATTGAACTTCCAAGAATCAAAGTTTTAATATTTACGCATCTTTCAAACTTCAACCAAGAGATTGAATTGCCCAATTTAAAGAATTGTGTTGTCTACGAATGTCCAAAACTATCTTTGACTCCAACAACTACTTTGGAGAAGCTCAAGAAAACTTTTCCTTATAAAGGAATTGAGAGCATTGAAGAGGGGCCTTCAGCAGAGGGTGATAAGACAAAACCTTTAACAACTGGGGTTGAAGACATTAGCATTGGAGGTGGTGTTGGAACTCACATTGAGTATAGTAGTGTGGAGATGGTACTAGACTCCAAGGCTGTTGAACATGGTGATGGGCCTAATGAAAATTGCAAAAGAACTTCTCCAAGTGTGAAGACTCATAATGTTAATAGTAACTTCAAAGAAGGTTTTAACTTGGTTGACAAAGAAGGTCAAATAGCTGTTGTTTCCAATGACCGCATTGTGACTGCAAGAAATGAAGAACCAGAGAAGGAATTTGTTGCAAAAGTTTCCACTTCAGAAATACCAAGAACGACAACATCATTAACAAACTTGCAACTAGTTGAAAGGCCAAGTTCAAGTTATTTGAATAAACCTCTACATGAAACACACTCAAATGCATTGGTGGACAAACAACGGATTAGTGAACCGTGTTTGATGAACCAACAAAAGCCACTAGGAGAAATTGTAAGTAGCCCCAAAATTCCTCAGAGTGAAATTAGGAGCAGCCAAACCGAGACACACACTACTAAAGAAAGTGGAGGCCATTCTAAAATTATTCAAGACTTTGGGACCAGTGATATCATGAGTTTATATGCATCTGTTATTGTGGGGAAAGAGGGTGAAGACAACATAGTTGGAAAGACCCTTCTTGAGTTGGAAAAGTATATAAAGATGTCTTTGAAGGACATAGTTAGCTCTGAGACTAACAGCATTAGCCTTTTGTCTGCTCTTAATTTCCTGTCCAACCTTCCTTTCAAAGATGTAACTCTATCAGATGGACTCAAAGATATTATAGGCACTATGCAGCAAGAGTTCCCAAGCATTGTACACTCCTTTAAGCAAGGCTTTGCTACCACTGACAAGTTAGCAGAACTTGAAGCTCGTGGGAATGAGGTGGCCACTACTCTTGGTTCCAAAATTTCCGAGGCAAGGAATTTCTATGATGAAGCTCAACTGAAGGAAGTAGTTTTGAAGGAACAAATCATTAGGTTGAAGGAAGAAATAAAAAGGAAAAATAAAAGGATTGTAGAAACTATTGGGTATAAAATGGAGCTTGAAAATGTGAGGAAAGACCGGTCTCAAATGGTGGAAGATGAAAGAAAAGTTCAACAAAAGTTATTTGAGGTGACTTATAAATGGTCATTTCTCTGTAGTCAATATGAGTATAATCGCATGGCTGCTAGAAATCTCTCATGA 5433 0.3609 MECILGFASSVSRDLVCGALNQLRYPCCFNNFVKKLEEEEGDLIVTRDSVQIFVTNAKKQTRKISEVVDKWLQDAINDVDNVNQLLEEAKAKKICCFGHCPNWIWQYRVGKKLANKNVYLEKFIEEGKKYVPFDHIASLPSGTVHILSEKCMDFESRQCAYEQLLEAVKNNDVAMIGLYGMGGCGKTTLVMEVRKLVEAEFDKVLFVPISSTVEVRSIQKGIASSLQYKFPETEVMERAQRLWSRLKQEKKILVILDDVWEKLDFDAIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLQILTDEEAWTLFQKKALISEGTSDALKDLGRLISNECKGLPVAIAAVASSLKGKALPIWSNALNKLRSSEPINIERGLIDPYKCLQLSYDNLDTKEAKSLFLLCAVFPEDYEIPVEVLTRYAIGLGVVGETQSYEEARNEVFAARFKLVSSCLLLDKKNEEGEYVKMHDIVRDVAHLIAKNENNIIKCEVKKDVIVEQNSVRYLWCEKFPNDLDCSILEFLFLKTKLEELDGIFKRMGRLKVLMLVNDKDGKTPLSTMSLKTLTNLRCLVISHYELSDFSFVSDMKKLQSLSLRGCALPSFPELQTNVATLKLLELYKCYIKGKKFEVIKRTHLLEELYIVDIEGEWDANNEDNIEFFNMFSVPQTLQRYAIVLGSRNFDNCIYKEFSSHHNTLLLDYFDISNEVVKSLAKRANDLFIANIKGDAKNIIPDIYQIEGGGLDELIKFDIRNSEEIECLIDTSNHSSKVVTLFSKLYKIRMKNMKNLRALWHCFQPANGPFENLKMLYLSGCPRLTSLFTYVVAQHLVQLKILNITRCDGLKHILVDDEKTEKSQGEFTTGHPVQIFQNLQEVEVNRCRELKDIFSTSVLRGLAQLKVLKIEECNMLDQIFGDIDPLTYQDKKEELVEIVEEGTLSSLASLTIIDCPKLGSIFTASIAKTLTFLEVLIIKRCNSLKHIVTHERINQQKENIVEDDHDFQSDISNFQSLKTLYIRECDLLQSNQDCEEIHIHFSALEMLALYNLPNFVSICATNNLTVTWSSLKEFTCYKCSYPFYNSINCLTAPADSREPINASKKDPKGVHNPLLTLQNISVTNSEVEGIFCLNGDGMIGQQVSLRLERLKLENIPQMTYIWVASKNSVNLQHLTTLKIIGCAKLKVIFPPSVLRSLPELKELIIKECMELKQIVGCEQGAPNNSLIFSNLQKLEFIGCAKLEVIFSKYDLRCLPMLSIVKIRKCKELRVIIEEDVEDNKLSNLLSPQAFFPKLEALYVGHCHKLKRFISGSASNDFPNLYLLIISGASELEEFVGRGQGKSDEIGKTKIELPRIKVLIFTHLSNFNQEIELPNLKNCVVYECPKLSLTPTTTLEKLKKTFPYKGIESIEEGPSAEGDKTKPLTTGVEDISIGGGVGTHIEYSSVEMVLDSKAVEHGDGPNENCKRTSPSVKTHNVNSNFKEGFNLVDKEGQIAVVSNDRIVTARNEEPEKEFVAKVSTSEIPRTTTSLTNLQLVERPSSSYLNKPLHETHSNALVDKQRISEPCLMNQQKPLGEIVSSPKIPQSEIRSSQTETHTTKESGGHSKIIQDFGTSDIMSLYASVIVGKEGEDNIVGKTLLELEKYIKMSLKDIVSSETNSISLLSALNFLSNLPFKDVTLSDGLKDIIGTMQQEFPSIVHSFKQGFATTDKLAELEARGNEVATTLGSKISEARNFYDEAQLKEVVLKEQIIRLKEEIKRKNKRIVETIGYKMELENVRKDRSQMVEDERKVQQKLFEVTYKWSFLCSQYEYNRMAARNLS* 1811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0033 1810 CDD AAA 160 285 - -
Pvu3g0033 1810 SUPERFAMILY RNI-like 1136 1354 - -
Pvu3g0033 1810 Gene3D Ribonuclease Inhibitor 498 671 IPR032675 -
Pvu3g0033 1810 Gene3D - 140 301 IPR027417 -
Pvu3g0033 1810 Gene3D - 397 478 IPR036388 -
Pvu3g0033 1810 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 652 - -
Pvu3g0033 1810 PANTHER PHOSPHATASE, PUTATIVE-RELATED 662 848 - -
Pvu3g0033 1810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 406 IPR027417 -
Pvu3g0033 1810 Coils Coil 1804 1810 - -
Pvu3g0033 1810 Coils Coil 72 92 - -
Pvu3g0033 1810 Coils Coil 1726 1753 - -
Pvu3g0033 1810 Gene3D - 304 395 IPR042197 -
Pvu3g0033 1810 Gene3D Ribonuclease Inhibitor 1265 1393 IPR032675 -
Pvu3g0033 1810 Gene3D Ribonuclease Inhibitor 1102 1264 IPR032675 -
Pvu3g0033 1810 Gene3D Ribonuclease Inhibitor 860 996 IPR032675 -
Pvu3g0033 1810 Gene3D Ribonuclease Inhibitor 674 859 IPR032675 -
Pvu3g0033 1810 Pfam NB-ARC domain 164 392 IPR002182 GO:0043531
Pvu3g0033 1810 MobiDBLite consensus disorder prediction 1573 1596 - -
Pvu3g0033 1810 PRINTS Disease resistance protein signature 175 190 - -
Pvu3g0033 1810 PRINTS Disease resistance protein signature 246 260 - -
Pvu3g0033 1810 PRINTS Disease resistance protein signature 339 353 - -
Pvu3g0033 1810 PRINTS Disease resistance protein signature 891 907 - -
Pvu3g0033 1810 PANTHER - 8 652 - -
Pvu3g0033 1810 PANTHER - 662 848 - -
Pvu3g0033 1810 SUPERFAMILY L domain-like 466 1044 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0033 Pvu-Chr3 289915 306040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0033 172 536 WRKY Transcription Factor Family AT5G45050 26.385 7.32e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0033 - - pvu:PHAVU_003G003000g 3553.07