Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0029 ATGGAGTGCCTCTTGGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTATGTGGCGCATTAAATCAATTACGTTATCCTTGTGATTTTAACAATTTCGTAAAAAAACTTGAAGAAGAAGAGCGCGATTTGATTGTAACGAAAGACAGTGTCCAAAAATTTGTTACAAATGCCAAGAAACAAACAAGAAAGACTAGTGAAGTTGTTGACAAGTGGTTGCAAGATGCTATTAATGACGTAGACAATGTGAATCAGTTGTTGAAAGAGGCAAAAGCCAAAAAATTCTGTTGCTTTGGGTACTGTCCAAATTGGATTTGGCAATATCGTGTAGGAAAAAAGTTAGCATATAAAAATGTGTACCTTGAAAAGTTCATTGCAGAGGGTAGAAAATATGTGCCATTTGACCGCATTGCTACACTTCCTTCAGGCACCCTTCATATTCTCACAGAAAAATGCATGAATTTTGAGAGTAGACAATCTACATATGAGAAGCTGCTCGAAGCAGTGAAAAATAATGATGTTGCCATGATTGGATTGTATGGGATGGGGGGGTGTGGTAAAACCACATTAGCAATGGAGGTTATGAAGTTAGTAGAAGCAGAACATTGTTTTGAAAAAGTTCTTTTTGTGCCTATTTCTAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCACTGCAGTATACATTTCCAGAAACTGAAGTAATGGAGAGGGCCCAACGATTGTGCTTGAGATTAAACCAAGAGAAAAACATTCTTATGATTTTAGATGATGTGTGGGAGAAGCTTGACTTTGGTGGCATTGGGATTCCCTCCTCTGAACATCATACAGTCTGCAAGATTCTCATTACCACTAGATCAGAAGAAGTTTGTACTTCAATGGATTGCCAAAGAAAGATTTACCTGCCAATTTTAACGGATGAAGAAGCGTGGACTCTTTTCCAAAATAAAGCACTTATATCTAAAAACACCCCTGATACCTTAAAGAATCTGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTAGTAGTTTGAAGGGAAAAGTTGAGACGATATGGAATGTTGCATTGAATAAGTTGAGAAGTTCTAAGCCAATAAATATTGAAAGAGGTTTGATTGATCCCTACAAGTGCTTGCAGCTGAGCTATGATAATTTGGATACTAAAGAAGCCAAATCACTTTTCCTATTTTGTTCTGTGTTCCCTGAAGATAGTGAAATTCCAATTGAAGTTTTAACAAGATATGCTATAGGATTAGGTGTAGTTGGAGAAGCACACTCTTATGAGGAGGCAAGGAGTGAAGTGGTTGCAGCCAAAATTAAGCTCGTCAGTTCTTGTTTATTGTTGGATGAAGAGGATGAATATGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCCAAGAAGGAGAATAAGATAATCAAGTGCGAAGAGGAAAAAGATGTGACTATTGAACAAAATTCAGTAAGATATCTATGGTGTGTGAAATTTCCAATTGATTTAGATTGTTCCAATCTTGAGTTTTTATTTTTAAAGACAAAATTGGAAGAATTTAATGGAATTTTCAAAAGAATGAGAATGCTCAAAGTTTTGATTCTAGTCAATGATAAGGATGGAATAACACCATTGTCAACAATGTGTTTAAAAACATTAACAAATCTTCGTTATCTAGGTATTTCTGGTTATGAATTGAGCGACTTCTCATTTGTAAGCCATATGAAGAAACTTCAAAGTCTTTCGATGAATGGTTGTTCATTGCCTTCATTTCCTGAATTACAAACCGATGTTGCAATTACACAAGTAACAACCTTAAAATTGTTACAATTGTACAAATGTGAAATGAAAGGGAAGAATTTCGAAGTGATCAAAAGAATCCCACTACTGGAAGAGTTGTACATTGTCGATATTGAAGGAGAATGGGATTCTAATAGTGAAGACAATATTGAATTCTTTAACACGTTTAGTGTCCCCAAAACACTGCAAAGGTATGCAATTGTATTAGGATCCAATAACTTTGGTGATTATAATTATAATTATTTTCACCCTCCTCCCAGAACTCTATTACTTAACCATTTTGACAAATCAAATGAGGTAATTAAGGGTTTGGCAAAAAAAGCAACATATCTCTTTGTAGCAAATATTCAGAGAGGCGCAAAAAATATCATCCCTGATATATTTCAAATTGAAGGAGGAGGTTTGGACGAGTTGAGTAAGTTTGAGATATGTAATTCTGAAGAGATAGAGTGTTTGATTGACACTAGTAACCATTTGAGTACAGTGGTATCTCCCTTCTCCAAGTTGTATAAGCTCAGAATGGTTAACTTGAAAAATCTAAGAGCTTTATGGCATTTTTCTCAACCTATAAGTGGACCTTTTGAGAACTTAGAGAAGTTGTATTTTAGTGATTGTCCAAAGTTGACATCTCTTTTCACGTATGTCGTTGCTCGAAGTTTGGTACAATTGAAAGTACTAAAAATTTCAACATGTGATGAACTGAAGCATATATTAGGAGATGATGACAAAACGAAGAAAAGTCAAGGTGAATTCACCACTAGACATCCTGTACAAATCTTCCAAAATCTTCAAAAAGTAGAGATACATAGTTGTAGAGAATTAAAACATATATTCTCGACCAACATTGTAAAGGGCTTAACTCAATTGAAAATGCTCAAGATAGAAAACTGTGACATGCTAGATCAAATAATTGGGGATATTGCTCCATCAACAGACCAAGATAATAAAGAAGAACTTGATGAAATCATTGAGGAAGGAACTCTATCAAGCCTTACAAGCCTTAAAATATTTTGTTGTCCGAAGTTAGGCTCAATTTTTACAGCATCTACAGCTAAGACCTTGACTTCTTTGGAAGAATTGTTCATTCAAAATTGCCTTAGCTTGAAGCTTATAGTAACTCATGAAAGGGTCAATCAAAATCATAAGGAAAATATTGGCGAGGATGACCATGACTTTCATAGTGATATTTCAATCTTCCAGGGTTTGAAAGTGCTACATATCAGTGGATGTGACTTATTGCAACGTATATTCCCTATCTCTTTTGTTGGAGGCATGATGAAATTGAATGATATAAGAGATGAAGAGATTGTTGATTTGAAAGATTTTTCAAGTCAAAATAAATTCAAAGACAATTCTTCTAATCAGGATTGTGATGAGATTCATATTCATTTTTCCGCATTGGAAAAAATCTCTCTTTACAATCTACCAAATTTTGTTAGCATTTGTGCTACCAACACTCTCACTGTGACATGGCCATCTTTGAAGAAGTTTTCTTGTGACAGATTTTCCTATCCTTTTTACAATCCCGTTAGTTGTTTGACTGTTCCTACCAATTCAAGAGAGCCTATTAGCGATCTAAAACGGTTTCAAAGCCATTTCTTCAGTTTGCAAGATCTATCCATAAGGAATTGTGAAGTAGAAGATATTTTTTGTCTTAATGGACATGGAATGGTTGGGCAACAAGTGAGTTTAAGGTTAGAGTATTTGCTTTTGGAAAATCTACCTCAAATGACTTATATTTGGGTGGCTTCCAAGATTTCAATTAATCTCCAACATCTTACCATATTAGAAATATTGGGATGTGCAAAATTGAAAGAAATATTTCCTCCCTCTGTTTTAAGAAGTTTACAAAAGTTGAAAATCCTAATCATAAAAGAATGCATGGAATTGAAGCAGATTGTTGGATGTGAACAAGGAGCTCCAAACAATTCTTTTACCCTCCCAAATCTTCGAAGATTAGAAATAATTGGATGTGCAAAATTGGAAGTAATATTTCCAAAGTATGTTTTAAGATGCCTACCAGAGTTAAAAAGTGTGAAAATAAGAAAATGCAAAGAATTAAGAGAAATCATTGAAGAGGATTTGGAAGACAAAAAAATGTCTAATCTTCTTTCTCCTCAGCCATGCTTCCCAAAACTAAAAGAATTGTATGTTGGACATTGCCATAAGCTGAAAAGATTTATCTCTGGATCTGCATCTAATGACTTTCCCAATCTTTATCTTTTGATCATAAATGGAGCCTCTAAACTAGAAGAACTTGTTGGATGTGGACAAGAAAAAGGTGACAGGATAGAAAAGAAAAAAGTTGAGCTTCCAAGAGTGAAACTTTTAATATTTATGCATATGTCAAACTTTGATCAAGAGATTGAATTGCCGAGTTTAAAAATTTGTGTTGTCTACGAAAGTCCAAAACTCTCTTTGACTCCAACAACTACTTTTGGAGAGCTGAAGGAAACTTTTCCTTATAAAGATAAATACTATAGAGTCTTCAAATATAAATTGTTACATGAGATTGAAAACATAGGAAATGAGAGCATTAAGGAGGGGCCTTCAGCAAAGGGTGATAAGACAAAACCTTTGTCAACTGGTGTTGAAGACATTAGCATTGGAGGTGGTGTTGCAACTCACATTGACTCTGGTGGCATGGACATACTTGCACAACATTCCAAGGTTGTTAAACAAGGTGATGGGTCTAATGAAAACTGTAAAAGAAATTCTCGATGTGTGAAGACCCAGAATGTTAACAATAGCTTCGAAGAAGGTTCTGACTTGGTTGGTAAAAAAGGTGAAATAGGTGTTGTTTCTATTGATCACAATGCTGCGAGAAATGAAGAACCAGAGAAAGAATTTGTTGCAAAAGTTTCTACTTCAGAAATACCAAGAACAACAACATCATTAACAAACTCACAACCATCTGAAAGGCTAACTCCATCTTATTTGAGTATTCCTCTACGTGAAACACCCTCAAATGCATTGGTGGACAAACAGCGGATTAGTGAATTGTGCTTGATGAACAGACAAAAGTCACTTGGAGAAATTGTAAGTAGCTCCGAAATTCCTTATAGTGAAATTAGGAGCAGTCAAACTGAGACCCACACTGTTAAAGAAAGTGGAGGCCATCCTAAAATTATTCAAGACTTTGGGGCCAATGATATCATGAGTTTATTTGCACCAGTTGTTGTGGGGAAAGAGAGTGAAGACAACATAGTTGGAAAGACCCTTGTTGAGTTGGAAAAGTATCTAAAGATGTCTTTGAAGGACATAGTTAGCTCTGAGACTAACAGCATTAGCCTTTTGTCTGCTATTAATTTCCTGTCCAACCTTCCTTTCAAAGATGTAACTCTATCAGATGGACTCAAAGATATTATAGAAATTATGCAACAAGAGTTCCCAAGCATTGCATGCTCCTTTAAGCAAGGTTTTGCTACCAATGAGAAGTTGGCAGAACTTGAAGCTCGTGGGAATGAGATGGCCACTACTCTTGGTTCCAAAATTTCTGAGGCAAAGAATTTCTATGATGAAGCTCAACTGAAGGAAGTAGTTTTGAAGGAACAAATCATTAGGTTGAAGGAAGAAATAAAAGTTTCTGAGGATGCCTTATCATCTCTGGAAGATGAAAAAAATAAAAGAATTGCAGAAACTATTGGGTACAAAATGGAGCTTGAAAATGTGAGGAAAGACCAGTCTCAAATTGTGGAAGATGAAAGAAAAGTTCAACAAAAATTATTTGAGGTGACTTATAAATGGTCAGTTCTATGTAGTCAATATGAGTACAATCGCATGACTGGTAGAAATTCCTCATGA 5637 0.3537 MECLLGFASSVSRDLVCGALNQLRYPCDFNNFVKKLEEEERDLIVTKDSVQKFVTNAKKQTRKTSEVVDKWLQDAINDVDNVNQLLKEAKAKKFCCFGYCPNWIWQYRVGKKLAYKNVYLEKFIAEGRKYVPFDRIATLPSGTLHILTEKCMNFESRQSTYEKLLEAVKNNDVAMIGLYGMGGCGKTTLAMEVMKLVEAEHCFEKVLFVPISSTVEVRRIQEKIASSLQYTFPETEVMERAQRLCLRLNQEKNILMILDDVWEKLDFGGIGIPSSEHHTVCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFQNKALISKNTPDTLKNLGRLISNECKGLPVAIAAVASSLKGKVETIWNVALNKLRSSKPINIERGLIDPYKCLQLSYDNLDTKEAKSLFLFCSVFPEDSEIPIEVLTRYAIGLGVVGEAHSYEEARSEVVAAKIKLVSSCLLLDEEDEYVKMHDIVRDVAHLIAKKENKIIKCEEEKDVTIEQNSVRYLWCVKFPIDLDCSNLEFLFLKTKLEEFNGIFKRMRMLKVLILVNDKDGITPLSTMCLKTLTNLRYLGISGYELSDFSFVSHMKKLQSLSMNGCSLPSFPELQTDVAITQVTTLKLLQLYKCEMKGKNFEVIKRIPLLEELYIVDIEGEWDSNSEDNIEFFNTFSVPKTLQRYAIVLGSNNFGDYNYNYFHPPPRTLLLNHFDKSNEVIKGLAKKATYLFVANIQRGAKNIIPDIFQIEGGGLDELSKFEICNSEEIECLIDTSNHLSTVVSPFSKLYKLRMVNLKNLRALWHFSQPISGPFENLEKLYFSDCPKLTSLFTYVVARSLVQLKVLKISTCDELKHILGDDDKTKKSQGEFTTRHPVQIFQNLQKVEIHSCRELKHIFSTNIVKGLTQLKMLKIENCDMLDQIIGDIAPSTDQDNKEELDEIIEEGTLSSLTSLKIFCCPKLGSIFTASTAKTLTSLEELFIQNCLSLKLIVTHERVNQNHKENIGEDDHDFHSDISIFQGLKVLHISGCDLLQRIFPISFVGGMMKLNDIRDEEIVDLKDFSSQNKFKDNSSNQDCDEIHIHFSALEKISLYNLPNFVSICATNTLTVTWPSLKKFSCDRFSYPFYNPVSCLTVPTNSREPISDLKRFQSHFFSLQDLSIRNCEVEDIFCLNGHGMVGQQVSLRLEYLLLENLPQMTYIWVASKISINLQHLTILEILGCAKLKEIFPPSVLRSLQKLKILIIKECMELKQIVGCEQGAPNNSFTLPNLRRLEIIGCAKLEVIFPKYVLRCLPELKSVKIRKCKELREIIEEDLEDKKMSNLLSPQPCFPKLKELYVGHCHKLKRFISGSASNDFPNLYLLIINGASKLEELVGCGQEKGDRIEKKKVELPRVKLLIFMHMSNFDQEIELPSLKICVVYESPKLSLTPTTTFGELKETFPYKDKYYRVFKYKLLHEIENIGNESIKEGPSAKGDKTKPLSTGVEDISIGGGVATHIDSGGMDILAQHSKVVKQGDGSNENCKRNSRCVKTQNVNNSFEEGSDLVGKKGEIGVVSIDHNAARNEEPEKEFVAKVSTSEIPRTTTSLTNSQPSERLTPSYLSIPLRETPSNALVDKQRISELCLMNRQKSLGEIVSSSEIPYSEIRSSQTETHTVKESGGHPKIIQDFGANDIMSLFAPVVVGKESEDNIVGKTLVELEKYLKMSLKDIVSSETNSISLLSAINFLSNLPFKDVTLSDGLKDIIEIMQQEFPSIACSFKQGFATNEKLAELEARGNEMATTLGSKISEAKNFYDEAQLKEVVLKEQIIRLKEEIKVSEDALSSLEDEKNKRIAETIGYKMELENVRKDQSQIVEDERKVQQKLFEVTYKWSVLCSQYEYNRMTGRNSS* 1879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0029 1878 PANTHER - 1006 1276 - -
Pvu3g0029 1878 PANTHER - 23 983 - -
Pvu3g0029 1878 PANTHER - 1201 1362 - -
Pvu3g0029 1878 Gene3D - 306 397 IPR042197 -
Pvu3g0029 1878 Gene3D - 143 303 IPR027417 -
Pvu3g0029 1878 MobiDBLite consensus disorder prediction 1567 1585 - -
Pvu3g0029 1878 Gene3D Ribonuclease Inhibitor 738 859 IPR032675 -
Pvu3g0029 1878 Gene3D Ribonuclease Inhibitor 1248 1382 IPR032675 -
Pvu3g0029 1878 Gene3D Ribonuclease Inhibitor 1096 1247 IPR032675 -
Pvu3g0029 1878 Gene3D Ribonuclease Inhibitor 860 999 IPR032675 -
Pvu3g0029 1878 Coils Coil 72 92 - -
Pvu3g0029 1878 MobiDBLite consensus disorder prediction 1553 1585 - -
Pvu3g0029 1878 CDD AAA 157 291 - -
Pvu3g0029 1878 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Pvu3g0029 1878 Coils Coil 1783 1817 - -
Pvu3g0029 1878 PRINTS Disease resistance protein signature 175 190 - -
Pvu3g0029 1878 PRINTS Disease resistance protein signature 248 262 - -
Pvu3g0029 1878 PRINTS Disease resistance protein signature 341 355 - -
Pvu3g0029 1878 PRINTS Disease resistance protein signature 829 845 - -
Pvu3g0029 1878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 408 IPR027417 -
Pvu3g0029 1878 SUPERFAMILY L domain-like 467 983 - -
Pvu3g0029 1878 Gene3D Ribonuclease Inhibitor 484 689 IPR032675 -
Pvu3g0029 1878 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1201 1362 - -
Pvu3g0029 1878 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 23 983 - -
Pvu3g0029 1878 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1006 1276 - -
Pvu3g0029 1878 SUPERFAMILY RNI-like 1139 1363 - -
Pvu3g0029 1878 Coils Coil 479 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0029 Pvu-Chr3 245309 258087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0029 157 505 WRKY Transcription Factor Family AT5G45050 25.606 3.39e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0029 - - pvu:PHAVU_003G003000g 2728.74