Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0028 ATGGAGTGCCTGTTGGGTTTTGCATCTTCTATTTCAAGAGATTTAGTGTGTGGAATATTAAATCAATTACGTTATCCTTGTTGCTATAACAATTTCGTTAAAAAACTTGAAGAAGAAGAAGAGGGCGATTTGATTGTAACGAGAGATAGTGTCCAAAAATTTGTTACAAATTCCAAAAGACAAACGAAAAAGACTAGTGAAGTTATTGACAAGTGGCTGCAAGATGCTATCAATGACGTAGACAATGTGAATAAGTTGTTGAAAGAGGCAAGAACAAAAAATATATGCTGCTTTGGGCACTGTCCAAATTGGACTTGGCGATACCGGGTAGGAAAAAAGTTAGCAAATAAAATTGTGTACCTTGAAAAGTTCATCGAAGAGGGTAGAAAATATGTGCCATTTGAGCGCATTGCTACCCTTCCTTCAGGCACCCTTGATATTCTCTCAGAAAAATGCATGAATTTCGAGAGTAGACAATCTGCATATGAGCAACTACTGGAAGCAGTGAAAAATAATGATGCTTCCATGATTGGATTGTACGGGATGGGGGGTTGTGGTAAAACCACATTGGCAATGGAGGTTAGGAAGTTAGTAGAAGCGGAGCATCTTTTTGACAAAGTTCTTTTTGTGTCTATTTCAAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCACTGCAGTATGCATTTCCAGAAACTGAAGTAATGGAGAGAGCCCAACGATTGTGCTTGAGATTAACCCAGGAGAAAAAAATTCTTGTGATTCTAGATGATGTGTGGGAGAAGGTTGACTTTGGTGGCATTGGGATTCCATCTTCTGAACACCATAAAGGTTGCAAGATTCTCATTACCACTAGATCAGAAGAAGTTTGTACTTCAATGGACTGTCAAAGAAAGATTTACCTCCCAACTTTAACGGATGAAGAAGCATGGACTCTTTTCCAAAATAAAGCACTTATATTTGAAGACACCCCTGATGCCCTAAAGCATATGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCAGTTGCCATTGCAGCTGTTGCTAGTAGTTTGAAGGGAAAATCCGAGACGGTATGGAGTGTTGCATTGAATAAATTGAGAAGTTCTAAGCCCATAAATATTGAAAGAGGTTTGAATGATCCCTACAAGTGCTTGCAATTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTTCTGTTGTGTTCTGTGTTCCCTGAAGATTTTGAAATTCCAATTGAACTATTAATAAAATGCGCAATAGGGTTAGGTGTAGTTGGGGAAACACACTCATATGAGGAGGCAAGGAGTGAGGTGATGGCAACCAAAATTAAGCTCGTTAGTTCTTGTTTACTGTTGGATGAAAAGGAGGAATGTGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCAAAGAATGAGAATAACATCATTAAGTGTGAAGAGGAAAAAGATGTGACTATTGAACAAAATTCGGTAAGATATCTATGCTGTTTGAAATTTCCAAATGATTTGGATTGTTCCAATCTTGAGTTTTTACTCTTACATACAAAAGTGAAAGAATTGGATGGAATTTTCAAAAGAATGGGAATGCTCAAAGTTTTAATTCTTGACAATGATGAGGACGCAAAAACACCATTGCCGAAATCATCTTTTAGAACACTAACAAATCTCCGATATCTATTTATTTCAAATTATGAATTGACCGACCTCACATTTGTAAGCGATATGAAGAAGCTTCAAAGTCTTTCATTAGTTGAATGTTCATTGCCTTTATTTGAAACTGATGTTGTAATTACACAAGCAATAACCTTAAAATTGTTAGAGTTGATCCGATGTGACGTTAAAGGAAAGATGTTTGAAGTGATCAAAAGAACTCCTCTACTGGAAGAGTTGTACATTATCGATACGGAAGGAGAATGGGATGCTAACAGTGAAGACTTTATTGAATTCTTTAACACATTTAGTGTCCCGCAAACACTGCAAAGGTACAAAGTTGTGTTAGGATCCGATGATTTTGATGATTATAATGATTATGAATTTTTCTCTAATCCCAGAACTTTATTACTTAACCATTTTGACATAGCAAATGAGGTAATTAAGGGTTTGGCAAAAAAAGCAACAAGCCTATTTGTAGCTAATATTCTGGAAGGCGCAAAAAATGTGATCCCAGATATATTTCAAATTGAAGAAGGAGGGTTGGATGAGTTGATTAAGTTTGAGATACGGGATTCTGAAGAGATAAAATGCTTGATTGACACTAGTAATCATTATAGTGAGGTGGTAACTCCCTTCTCCAAGTTGCATTCATTGAGAATCGATGGCATGGAAAATCTAAAAGTTTTATGGCATTGTTTTCAACCTGTCAATGGGCCTTTTGAGAACTTAGAGAAGTTGTATTTAAGTGATTGTCCACGGTTGACATCTCTCTTCACGTATGTCGTTGCTCGAAGTTTGGTACAATTGAAAATATTAAAAATATCAAGATGTGATGAACTGCAGCATATATTAGCAGATGATGACAAAACAGAGAAAAGTCAAGGTGAATTCACCACTGGGAATCCTGTACATATCTTCCAAAATCTTCAAAAAGTAAAGATATGTAGATGTAGAGAATTAAAACATATATTCTCGACCAGCATTGTAAGAAACTTAACTCAACTCAAAGTGCTCAAGATAGAAGGATGCAACATGCTAGATCAAATATTTGGGGATATTCTACCATTAGCACACCATGATAAAAAAGAAGAACCTGGTGAAATCATTGAGGAAGATTTCGAAGACACTGAAGTTTCTGTGGGGGACATACGTGAGTTCATTTCATCACAGATTGATGAACAATCAATGAAGGAATTTATTGAGGAAGAACCTGGTTCAGAGCATAACCAAAACGAAGCACACTCACCGGAGATTGGGGACGTAGGAAATGAAAGCATTGAAGAGGGGCCTGCAGTAGAGGGTGATAAGACAAAACCTTTGTTAACTGGTGTTGAAGACATTAGCAATGGAGGTGGTGTTGCAACTCACGTTCAGTCTGGTGGTGTGGACATACTTGCAAAACATTCCAAGGTTGTTGAACAAGATGATAAAATGAATGAAGGCATGGCAGGAATCACGCCAAGCCAAGAAATCCAGTTAGAAGAAGGGTTGAATCTGTTGGATAAACAAGAGGAAATACATATTGTTTCTAACAACAACAACATTGACATTTCTCCAGATATTCATACAAGATTGGGAGCATATAAACATTTTGTTGATTTGGATGATGCACAAATTGCTCTTCTTGTGGAGGCAATAACAACATATCCTCATCTTTGGAATGCTTGCGAGAAGTTCAGTGAGCGCTTTCAAGCTTGGAGGTTGAAAATTTTGGCAGATATGTTGTTGTTCCTGCAGAAGGGAAGTGGCGATAATGTTATTCCTCAAAGAGAAAAAGATTTCCATAAACTATGTGAAAAAGCTATTGAGATAGGATTTGAGAGTTCATGGGTAGATGAAATGCGTCAACGTGTTGTGGTGAGGGATCCTAAGCTGAGAGAGGAAATTGCACAGAGACAAATGGATGAGAATCCTAAGAGGTCTAGTAGTGTGGAGATGGTACTAGATTCTCAGGCTGTTGAACATGGTGATGGGCCTAATGAAAACTGCAAAAGAACTTCTCCAAGTGTGAAGACCCAGAATGTTAACAATAACTTCGAAGAAGGTTCTAACTTGGTTGACAAAGAAGGTGAAATAGTTGTTGTTTCTAATGATCGCATTGTGACTGCGAGAAATGAAGAACCAAAGAAGGAATTTGTTGCAAAAGTTTCCACTTCAAAAATACCAAGAACAACAACATCATTAACAAACTCGCAACCAGTTGAAAGGCCAAGTCCAAGTTACTCGAATATACCTCTACGTGAAACACACTCAAATACTGAAATTTGGAGCAATCAAACTGAGACAGACACGGCTAAAGAAAGTGAAGGTCATCCTAAAATTATTCAAGACTTTGGGGCCAATGATATAATGAGTTTATTTGCACCAATTGTTGTGGGGAAAGAGGGTGAAGATAATTTAGTTGGAAATACCCTTGTTGAGTTAGAAAAGTATCTAAAGATGTCTCTGAAGGACATAGTTAGCTCTGAGACTAACAACATTCGTCTTTTGTCTGCTCTTAATTTCCTGTCCAACCTTCCTTTCAAAGATGTAACTCTATCAGATGGACTCAAAGATATTATAGGCACTATGCAGCAAGAGTTCCCAAGCATTGTATGCTCCTTTAAGCGAGGCTTTGCTACCATTGAGAAGTTGGCAAAACTTGAAGCTCGTGGAAATGAGGTGACCATTTCTCTTGGTTCCAAAATTTCTGAGGCAAAGAATTTTTATGATGAAGCTCAACTGAAGGAAGTTGTTTTAAAGGAAGAAATAAAAGTTTGTGAGGATGCCTTATCATCTCTGGAGGAGGAAAAAAATAAATGCATTGCGGAAACTATTGGGTACAAAATGGAGCTTGAAAATGTGAGGAAAGACAATTCTCAAATGGTGGAAGATCAAAGAAAAATTGAACAAAAGTTGTTTGAGGTGACTTATAAATGGTCAATTCTATGTAGTCAATATGAGTACAATCGCATGACTGCCAGAAATCCCTCATAA 4665 0.3728 MECLLGFASSISRDLVCGILNQLRYPCCYNNFVKKLEEEEEGDLIVTRDSVQKFVTNSKRQTKKTSEVIDKWLQDAINDVDNVNKLLKEARTKNICCFGHCPNWTWRYRVGKKLANKIVYLEKFIEEGRKYVPFERIATLPSGTLDILSEKCMNFESRQSAYEQLLEAVKNNDASMIGLYGMGGCGKTTLAMEVRKLVEAEHLFDKVLFVSISSTVEVRRIQEKIASSLQYAFPETEVMERAQRLCLRLTQEKKILVILDDVWEKVDFGGIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLPTLTDEEAWTLFQNKALIFEDTPDALKHMGRLISNECKGLPVAIAAVASSLKGKSETVWSVALNKLRSSKPINIERGLNDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDFEIPIELLIKCAIGLGVVGETHSYEEARSEVMATKIKLVSSCLLLDEKEECVKMHDIVRDVAHLIAKNENNIIKCEEEKDVTIEQNSVRYLCCLKFPNDLDCSNLEFLLLHTKVKELDGIFKRMGMLKVLILDNDEDAKTPLPKSSFRTLTNLRYLFISNYELTDLTFVSDMKKLQSLSLVECSLPLFETDVVITQAITLKLLELIRCDVKGKMFEVIKRTPLLEELYIIDTEGEWDANSEDFIEFFNTFSVPQTLQRYKVVLGSDDFDDYNDYEFFSNPRTLLLNHFDIANEVIKGLAKKATSLFVANILEGAKNVIPDIFQIEEGGLDELIKFEIRDSEEIKCLIDTSNHYSEVVTPFSKLHSLRIDGMENLKVLWHCFQPVNGPFENLEKLYLSDCPRLTSLFTYVVARSLVQLKILKISRCDELQHILADDDKTEKSQGEFTTGNPVHIFQNLQKVKICRCRELKHIFSTSIVRNLTQLKVLKIEGCNMLDQIFGDILPLAHHDKKEEPGEIIEEDFEDTEVSVGDIREFISSQIDEQSMKEFIEEEPGSEHNQNEAHSPEIGDVGNESIEEGPAVEGDKTKPLLTGVEDISNGGGVATHVQSGGVDILAKHSKVVEQDDKMNEGMAGITPSQEIQLEEGLNLLDKQEEIHIVSNNNNIDISPDIHTRLGAYKHFVDLDDAQIALLVEAITTYPHLWNACEKFSERFQAWRLKILADMLLFLQKGSGDNVIPQREKDFHKLCEKAIEIGFESSWVDEMRQRVVVRDPKLREEIAQRQMDENPKRSSSVEMVLDSQAVEHGDGPNENCKRTSPSVKTQNVNNNFEEGSNLVDKEGEIVVVSNDRIVTARNEEPKKEFVAKVSTSKIPRTTTSLTNSQPVERPSPSYSNIPLRETHSNTEIWSNQTETDTAKESEGHPKIIQDFGANDIMSLFAPIVVGKEGEDNLVGNTLVELEKYLKMSLKDIVSSETNNIRLLSALNFLSNLPFKDVTLSDGLKDIIGTMQQEFPSIVCSFKRGFATIEKLAKLEARGNEVTISLGSKISEAKNFYDEAQLKEVVLKEEIKVCEDALSSLEEEKNKCIAETIGYKMELENVRKDNSQMVEDQRKIEQKLFEVTYKWSILCSQYEYNRMTARNPS* 1555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0028 1554 Coils Coil 73 93 - -
Pvu3g0028 1554 SUPERFAMILY L domain-like 468 913 - -
Pvu3g0028 1554 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 409 IPR027417 -
Pvu3g0028 1554 PANTHER - 8 652 - -
Pvu3g0028 1554 PANTHER - 670 850 - -
Pvu3g0028 1554 Coils Coil 1508 1528 - -
Pvu3g0028 1554 Gene3D - 307 392 IPR042197 -
Pvu3g0028 1554 MobiDBLite consensus disorder prediction 963 977 - -
Pvu3g0028 1554 Pfam NB-ARC domain 164 396 IPR002182 GO:0043531
Pvu3g0028 1554 Gene3D - 145 304 IPR027417 -
Pvu3g0028 1554 MobiDBLite consensus disorder prediction 1225 1244 - -
Pvu3g0028 1554 MobiDBLite consensus disorder prediction 1216 1244 - -
Pvu3g0028 1554 MobiDBLite consensus disorder prediction 1287 1309 - -
Pvu3g0028 1554 MobiDBLite consensus disorder prediction 963 1001 - -
Pvu3g0028 1554 Coils Coil 1473 1500 - -
Pvu3g0028 1554 Gene3D - 393 479 IPR036388 -
Pvu3g0028 1554 PRINTS Disease resistance protein signature 176 191 - -
Pvu3g0028 1554 PRINTS Disease resistance protein signature 249 263 - -
Pvu3g0028 1554 PRINTS Disease resistance protein signature 342 356 - -
Pvu3g0028 1554 PRINTS Disease resistance protein signature 893 909 - -
Pvu3g0028 1554 Gene3D Ribonuclease Inhibitor 487 921 IPR032675 -
Pvu3g0028 1554 PANTHER PHOSPHATASE, PUTATIVE-RELATED 670 850 - -
Pvu3g0028 1554 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0028 Pvu-Chr3 223580 232949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0028 158 622 WRKY Transcription Factor Family AT5G45050 24.510 3.22e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0028 - - pvu:PHAVU_003G002500g 3051.54