Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0027 ATGGAGTGCCTCTTGGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGTTGCTTTAACAATTTTCTAAAAAAGCTTGAAGAAGAAGAGGGCGATTTGATTGTAACGAGAGATAGTGTTCAAAAATTTGTTACAAATGCCAAGAAACAAACAAGAAAGACGAGTGAAGTTGTTGACAAATGGCTGCAAGATGCTATCAATGACGTAGACAATGTGAATCAGTTGTTGAAAGAGGCAAAAGCGAAAAGAATTTGCTGCTTTGGGCACTGTCCAAATTGGATTTGGCAATACCGTGTAGGAAAAAAGTTAGCAAATAAAAATGTGTACCTTGAAAAGTTCATCGCAGAGGGTAGAAAATATGTGCCATTTGACCGCATTGCTACACTTCCTTCAGGCACCCTTGATATTCTCTCAGAAAAATGCATGAATTTTGAGAGTAGACAATCTGCATATGAGAAACTACTAGAAGCAGTGAAAAATAATGATGTTGACATGATTGGATTGTATGGGATGGGGGGTTGTGGTAAAACCACCTTAGCAATGGAGGTTATGAAGTTAGTAGAAGCAGAACATTTTTTTGAAAAAGTTCTTTTTGTGCCTATTTCTAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCATTGCAGTATACATTTCCAGAAACTGAAGTAATGGAGAGGGCCCAACGATTGTGCTTGAGATTAAACCAAGAGAAAAAAATTCTTGTGATTCTAGATGATGTGTGGGAGAAGCTTGACTTTGGTGGCATTGGGATTCCCTCCTCTGAACATCATAAAGGCTGCAAGATTCTCATTACCACTAGATCAGAAGAAGTTTGTACTTCAATGGATTGTCAAAGAAAGATTTATTTGCCAATTTTAACGGATGAAGAAGCGTGGACTCTTTTCCAAAATAAAGCACTTATATTTGAAGACACCCCTGATACCTTAAAGAATCTGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCTGTTGCAATTGCAGCTGTAGCTAGTAGTTTGAAGGGAAAAGCGGAGACGATATGGAGTGTTGCATTGAATAAGTTGAGAAGTTCTAAGCCAATAAATATAGAAAGAGGTTTGATTGATCCCTACAAGTGCTTGCAGCTGAGCTATGATAATTTGGATAATAAAGAAGCTAAATCACTTTTCCTATTGTGTTCTGTGTTCCCTGAAGATTATGAAATTCCATTGGAAATTTTAACAAGATATGCTATAGGATTAGGTGTAGTTGGAGAAGCACACTCTTATGAGGAGGCAAGGAGTGAAGTGGTTGCAGCCAAAATTAAGCTCGTTAGTTCTTGTTTATTGTTGGATGAAAAGGATGAATATGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCAAAGAATGAGAATAAGATAATCAAGTGCGAAGAGGAAAAAGATGTGACTATTGAACAAAATTCAGTAAGATATCTATGTCTTTCGTTGAATGGTTGTTCATTGTCTTCATTTGATGTTGCAATTACACAAGTAACAACCTTAAAATTGTTACACGTGTACAAATGTGAAATGAAAGGGAAAAATTTTGAAGTGATCAAAAGAACCCCACTACTGGAAGAGTTGTACATTGTCGATATCGAAGGAAAATGGACTGCTAACAGTGAAGACTATATTGAATTCTTTAACACATTTGGTGTCCCCCTAACACTGCAAAGGTATTCAATTGTATTAGGATCCGATAACTTTTATGATTATAGTTATTTTCAATATCGTCCCAGAACTCTATTGCTTAACCATTTTCAGATATCAAATGAGGTAATTAAGGGTTTGGCAAAAAAAGCAACAAATCTATTTGTAGCAAATATTCAGGTCGGCGCAAAAAATATCATCCCTGATATATTTCAAATTGAAGGAGGAGGTTTGGATGAGTTGAGTGAGTTTGAGATACGTAATTCTGAAGAGATAGAGTGTTTGATTGACACTAGTAACCAATCGAGTACGGTGGTAACTCACTTCTCCAAGTTGTATAATCTCAGAGTGGAAAAAATGAAAAATTTAAGAGCTTTATGGTATTGTTTTCAACCTATCAATGGGCCTTTTGAGAACTTAGAGAAGCTGAATTTAAGTGATTGTCCACAGTTGACATCTATCTTCACGTATATCGTTGCTCGAAGTTTGGTACAATTGAAAATATTAAAAATATCAAGATGTGATGAACTGAAGCATATATTAGCTGATGATGACAAAACAGAAAAAAGTCAAGGTGAATTCACCACTGAGCATCCTGTACAAATCTTCCAAAATCTTCAGGAAGTAAAGGTAAATAGTTGTAGAAAATTAAAACATATATTCTCGGCCAACATTGTAAGAGGCTTAACTCAATTGAAAATGCTCAAGATACAAGAATGTGACATGCTAGATCAAATAATTGGGAATATTGTTCCATCTGTAGACCAAAATAAAAAAGAAGAACTTGATGAAATCATTGAGGAAGGTAAGCATCCACATTTGTATAGCACTTCAATTCCATCAACAACAATTGTGAACAATAGCCCAGGATCTCTATCCAGCCTTGCAAGCCTTAGGATAAATGATTGTCCGAAGTTAGGTTCAATTTTTACAGCATCTACAGCTAAGACGTTGACTTCTTTGGAAGAATTGATCATAAAAAAGTGCAATAGTTTGAAGCATATCATAACTCATGAAAGGGTCAATCAAAATCAGAAGGAAAAAAATTTCGAGGATGACCATGACTTTCATATTGATATTTCAATCTTCCAAAGTTTGAAAAAGCTACGTATTTGTGGATGTGACTTATTGCAACGTATATTCCCTATCTCTTTTGTTGGAGGTATGATGAAAGAGGTAGTTGATTTGAAAGATTTTTCAAGACAAAATAATTTCAAAGAGAATTCTTGTCACCAACAACAAAATAATACTCAGATTGAGCTTCCTACTTTAGAAGTACTCGAACTTGATCATACCCTGGGTAGCACCGTTCTAGACAATTATCTTATAAGATGTCCATCTGTAGGAGAACTATCATTAGCTATTGGGAGACGTGTTGAGTTTTTTACTATAAATTGTTCAGCAAATGGTTCGAAAGCTAGACACGAAGATTATATTGCGATCAAGATATTGAACTCAGATTTTGTTCCTCCAGTTGAAAGTGTTGAATATCTTTCAAAACAACCACAGGGTTTGACCTTGCTTATTATGCATAATATAAGAGATATTGAATTGAAAGGCTTTGATAAGGTAAAGTACCTTTTTAAATCGTCTATTGCTTCATCATTGATGTTGGAAAGCTTGACAATTAGGCAATGTGATGGACTTGAGCACATTATAGACATTGAAGATGAATATGGCAAAGAGAGTTTGAATGCCATCTTCCCAAACTTAAGATACCTCTCAGTAAGTGATTGTGGCCAATTGAAATATATGCTTGGCCAATATCCCGTAGCTAATCAGGATTGTGAGGAGATTCATATTCATTTCTCAGCATTGGAAATACTCTATCTTTATAATCTACCAAATTTTGTTAGCATTTGTGCTACCAACAATCTCACTATGACGTGGCCATCTTTGAAGGAGTTTTATTCTGATAGTTGTTTGACGGTTCCTACGGATTCAAGAGAGCATTTTAGCATAAGCAAAAAGGATCCAAAAGGAATTCAGAACCATTTCTTCACTTTGCAATATGTAACCATAAGGAATTCTGAAGTAAAAGCTTCTGAACTAGAAGAGCTTGTTGGATGTGGACAAGGAAAAAGTGAAGAGATAAGAAAGAGTAAAGTTGAGCTTCCAAGACTGAAACTTTTAATATTTATGCATCTTTCAAACTTTTGTCAAGAGACTGAATTGCCGAATATAAAGAATTGTGTTGTCTATGAATGTCCAAAACTCTCTTTAACTCCAACAACTACTCTTGGGGAGCTCAAGGAAAATTTTCCTTATAAAGATTTGAGAAACACTAGGGTTTATAGATGGGAGATAGAAGTGATGATGAGCAATTTAGATGAAGATTCTGCTAGCAGTGAGTTCACTTCATTACATGAGATTGGGGAAGTAGGAAATGAGAACATTGAAGAGGGGTCTACAGCAGAGGGTGATAAGACAAAATCTTTGTCAACTGATGTTGAAGACATTAGCATTGGAAGTGGTGTTGCAATTCACATTCAGTCTGGTGACGTGGACATACTTGAACAAGATGATAAGATGAATGATGGCAAGGCAGGAATCATGCCAAGCCAAGAAATCCAAGTAGAAGAAGGGTTGAACCTATTGGACAAACAAGAGGAGATACATATTGTTTCTAACAACAATATTGACATTTCTCCAGATATTCGTACAAGATTGGGAATGTATAAACATTTTGTTGATCTAGATGATGCACAAATTGCTCTTTTGGTGGAGGCGATAACAACATATCCTCATCTTTGGAATGCTTGCGAGAAATTTAGTGATCGCTTTCAAGCTTGGAGGTTGAAAATTTTGGCAGATATATTGTTGTTCCTTCAGAAGGAAAGTGTTGATAATGTTACTCCTCAAAGAGAAAAAGAGTTTCATAAACTATGTGAAGAAGCTGTTGAGATTGGATTTGAGAGTTCATTGATAGATGAAATGCGTCAACATGTTTTGACGAGGGATCCTAAGCTGAGAGAGGACATTGCGGAGAGACAAATGGATGAGAATCCTAAGAGGTTTAATAGTGTGGATATGGTATTAGATTCCCAGGTTGTTAAACAAGGTGATGAGTCTAATGAAAACTGTAAAAGAAGTTCTAGATGTGTGAAGACCCAGAATGTTAACAATAGCTTCGAAGAAAGTTCTAACTTGGTTGATAAAGAAGGTGAAATAGGTGTTGTTTCTATTGATCGCATTGCTGCGAGAAATGAAGAACCAGAGAAGGAATTTGTTGCTGAAGTTTCCACTCCAGAAATACCAAGAACAACAACATCATTAACAAACTCACAACCATCTGAAAGGCCAACTCCATCTTATTTGAATATTCCTCTACGTGAAACACTCTCAAATGCATTGGTGGACAAACAGCGGATTAGTGAACCGTGCTTGATGAACCGACAAAAGTCACTTGGAAAAATTAGTATTGAGCGAGAAGCTGTAGAGAAAACCATAGAAAAGAACACCAGTATCACAACTTCATCGATTCATTCTGAATCCACTAGCTCACAGTTTGACCAAATATTTACTTCCCAAACTAAATCACATACACATAGTGAAATTAGGAGCAGTCGAACTGAGACACACACTGTTAAAGAAAGTGGAGGTCATCCTAAAATTATTCAAGACTCTGGGGCCAATGATATCATGAGTTTGTTTGCACCAGTTGTTGTGGGGAAAGAGAGTGAAGACAACATAGTTGGAAAGATCTTTGTTGAGTTGGAAAAGTATCTAAAGATGTCTTTGAAGGACATAGTTAGCTCTGAGACTAACAGTATTAACCTTTTGTCTGCTCTTAATTTCCTGTCTAACCTTCCTTTCAAAGATGTATCTCTATCAGATGGACTCAAAGATATTATAGGCACTATGCAGCAAGAGTTCCCAAGCATTGTATGCTCCTTTAAGCAAGGCTTTGCTACCACTGATAAGTTGGCAGAACTTGAAGCTCGTGGGAATGAGGTGGCCACTACTCTTGGTTCCAAAATTTTCGAGGCAAAGAATTTCTATGATGAAGCTCAACTGAAGGAAGTAGTTTTAAAGGAACAAATCATTAGGCTGAAGGAAGAAATAAAAGTTTGTGAGGATGCCTTATCCTCTCTGGAAGAGGAAAAAAATAAAAGGATTGCAGAAACTATTGGGTACAAAATGGAGCTTGAAAATGTGAGGAAAGACCAGTCTCAAATGGTGGAAGATGAAAGAAAAGTTCAACAAAAATTATTTGAGGTGACTTATAAATGGTCAGTTATGTGTAGTCAGTATGAATACAATCGCATGGTTGCTAGAAATTCCTCATGA 6018 0.3624 MECLLGFASSVSRDLVCGALNQLRYPCCFNNFLKKLEEEEGDLIVTRDSVQKFVTNAKKQTRKTSEVVDKWLQDAINDVDNVNQLLKEAKAKRICCFGHCPNWIWQYRVGKKLANKNVYLEKFIAEGRKYVPFDRIATLPSGTLDILSEKCMNFESRQSAYEKLLEAVKNNDVDMIGLYGMGGCGKTTLAMEVMKLVEAEHFFEKVLFVPISSTVEVRRIQEKIASSLQYTFPETEVMERAQRLCLRLNQEKKILVILDDVWEKLDFGGIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFQNKALIFEDTPDTLKNLGRLISNECKGLPVAIAAVASSLKGKAETIWSVALNKLRSSKPINIERGLIDPYKCLQLSYDNLDNKEAKSLFLLCSVFPEDYEIPLEILTRYAIGLGVVGEAHSYEEARSEVVAAKIKLVSSCLLLDEKDEYVKMHDIVRDVAHLIAKNENKIIKCEEEKDVTIEQNSVRYLCLSLNGCSLSSFDVAITQVTTLKLLHVYKCEMKGKNFEVIKRTPLLEELYIVDIEGKWTANSEDYIEFFNTFGVPLTLQRYSIVLGSDNFYDYSYFQYRPRTLLLNHFQISNEVIKGLAKKATNLFVANIQVGAKNIIPDIFQIEGGGLDELSEFEIRNSEEIECLIDTSNQSSTVVTHFSKLYNLRVEKMKNLRALWYCFQPINGPFENLEKLNLSDCPQLTSIFTYIVARSLVQLKILKISRCDELKHILADDDKTEKSQGEFTTEHPVQIFQNLQEVKVNSCRKLKHIFSANIVRGLTQLKMLKIQECDMLDQIIGNIVPSVDQNKKEELDEIIEEGKHPHLYSTSIPSTTIVNNSPGSLSSLASLRINDCPKLGSIFTASTAKTLTSLEELIIKKCNSLKHIITHERVNQNQKEKNFEDDHDFHIDISIFQSLKKLRICGCDLLQRIFPISFVGGMMKEVVDLKDFSRQNNFKENSCHQQQNNTQIELPTLEVLELDHTLGSTVLDNYLIRCPSVGELSLAIGRRVEFFTINCSANGSKARHEDYIAIKILNSDFVPPVESVEYLSKQPQGLTLLIMHNIRDIELKGFDKVKYLFKSSIASSLMLESLTIRQCDGLEHIIDIEDEYGKESLNAIFPNLRYLSVSDCGQLKYMLGQYPVANQDCEEIHIHFSALEILYLYNLPNFVSICATNNLTMTWPSLKEFYSDSCLTVPTDSREHFSISKKDPKGIQNHFFTLQYVTIRNSEVKASELEELVGCGQGKSEEIRKSKVELPRLKLLIFMHLSNFCQETELPNIKNCVVYECPKLSLTPTTTLGELKENFPYKDLRNTRVYRWEIEVMMSNLDEDSASSEFTSLHEIGEVGNENIEEGSTAEGDKTKSLSTDVEDISIGSGVAIHIQSGDVDILEQDDKMNDGKAGIMPSQEIQVEEGLNLLDKQEEIHIVSNNNIDISPDIRTRLGMYKHFVDLDDAQIALLVEAITTYPHLWNACEKFSDRFQAWRLKILADILLFLQKESVDNVTPQREKEFHKLCEEAVEIGFESSLIDEMRQHVLTRDPKLREDIAERQMDENPKRFNSVDMVLDSQVVKQGDESNENCKRSSRCVKTQNVNNSFEESSNLVDKEGEIGVVSIDRIAARNEEPEKEFVAEVSTPEIPRTTTSLTNSQPSERPTPSYLNIPLRETLSNALVDKQRISEPCLMNRQKSLGKISIEREAVEKTIEKNTSITTSSIHSESTSSQFDQIFTSQTKSHTHSEIRSSRTETHTVKESGGHPKIIQDSGANDIMSLFAPVVVGKESEDNIVGKIFVELEKYLKMSLKDIVSSETNSINLLSALNFLSNLPFKDVSLSDGLKDIIGTMQQEFPSIVCSFKQGFATTDKLAELEARGNEVATTLGSKIFEAKNFYDEAQLKEVVLKEQIIRLKEEIKVCEDALSSLEEEKNKRIAETIGYKMELENVRKDQSQMVEDERKVQQKLFEVTYKWSVMCSQYEYNRMVARNSS* 2006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0027 2005 MobiDBLite consensus disorder prediction 1753 1781 - -
Pvu3g0027 2005 PRINTS Disease resistance protein signature 175 190 - -
Pvu3g0027 2005 PRINTS Disease resistance protein signature 248 262 - -
Pvu3g0027 2005 PRINTS Disease resistance protein signature 341 355 - -
Pvu3g0027 2005 PRINTS Disease resistance protein signature 737 753 - -
Pvu3g0027 2005 PANTHER - 583 760 - -
Pvu3g0027 2005 PANTHER - 775 956 - -
Pvu3g0027 2005 PANTHER - 869 1217 - -
Pvu3g0027 2005 PANTHER - 8 484 - -
Pvu3g0027 2005 MobiDBLite consensus disorder prediction 1649 1682 - -
Pvu3g0027 2005 Gene3D Ribonuclease Inhibitor 768 959 IPR032675 -
Pvu3g0027 2005 Gene3D Ribonuclease Inhibitor 606 767 IPR032675 -
Pvu3g0027 2005 Coils Coil 72 92 - -
Pvu3g0027 2005 Gene3D Ribonuclease Inhibitor 1068 1379 IPR032675 -
Pvu3g0027 2005 Gene3D - 306 397 IPR042197 -
Pvu3g0027 2005 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Pvu3g0027 2005 SUPERFAMILY L domain-like 466 957 - -
Pvu3g0027 2005 Gene3D - 144 303 IPR027417 -
Pvu3g0027 2005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 408 IPR027417 -
Pvu3g0027 2005 MobiDBLite consensus disorder prediction 1659 1682 - -
Pvu3g0027 2005 CDD AAA 157 287 - -
Pvu3g0027 2005 PANTHER PHOSPHATASE, PUTATIVE-RELATED 869 1217 - -
Pvu3g0027 2005 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 484 - -
Pvu3g0027 2005 PANTHER PHOSPHATASE, PUTATIVE-RELATED 775 956 - -
Pvu3g0027 2005 PANTHER PHOSPHATASE, PUTATIVE-RELATED 583 760 - -
Pvu3g0027 2005 MobiDBLite consensus disorder prediction 1759 1777 - -
Pvu3g0027 2005 Coils Coil 1910 1944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0027 Pvu-Chr3 210460 219942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0027 157 505 WRKY Transcription Factor Family AT5G45050 26.829 1.94e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0027 - - pvu:PHAVU_003G002700g 1814.28