Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0026 CCATGGATTCCTTTCATCTCTGTGAAGGCTGACTCGACCTGTGCCCGAACTGACTTGGCTCGATCTGGGTCCGAGTCAACTCGACTCCCTGGCCTTGGTCAACTTGGCTCAACATGGACCCGGGCCAACTACACTCGACCTGAGCCCGAGTTGACTCGACTCGATATAGGCTCAACATGGGCCCAGGTCGACTTGGAACGACATGGACATGGGTCATTTCGACTCGACACTAGCCCGTGCCCACTTGACTCGACATGGGTTCAGACTGACTCGGCTCGACATGGAGATTTAGTGTGTGGAGCATTAAATCAATTACGTTATCCTTGTTGTTTTAACAATTTCATCAAAAAGCTTGAGCAAGAAGAGGGTGATTTGATTGTAACGAGAGATAGTGTGCAAACATTTGTTGCACATGCCGAGAGACAAACCAGAAAGACTAGTGAAGTTGTCGACAAGTGGCTGCAAGATGCTATCATTAACGTAGACAATGTGAGTCAGTTGTTGAAAGAGGCAAAAACAAAAAAAATATGTTGCTTTGGGCACTGTCCAAATTGGATTTGGCGACACCGTGTAGGAAAAAAGTTAGCAAATAAAACTGTGGACCTTGAAAAGTTCATTGTAGAGGGTAGAAAATATGTGCCATTTGACCGCATTGCTACACTTCCTTCAGGCACCTTGAATATTCTTTCAGAAAAATGCATGAATTTTGAGAGTAGACAATTTGCATATGAGAAACTACTGGAAGCAGTGAAAAATAATGATGTTGCCATGATTGGACTGTATGGGATGGGGGGTTGTGGTAAAACCACCTTAGCAATGGAGGTTAGGAAGTTAGTAGAAGCAGAGCATCTTTTTGACAAAGTTCTTTTTGTGCCTATTTCTAGTACAGTGGAAGTTCGAAGGATCCAAGAAAAAATTGCAAGTTCACTGCAATATATATTTCCAGAAACCGAAGAAATGGAGAGAGCCCAACGATTGTGCTTGAGATTAACCCAAGAAAAAAATATTCTTATGATTCTAGATGATGTGTGGGAGAAGCTTGACTTTGGGGGCATTGGGATTCCATCCTCTGAACACCATAAAGGCTGTAAGATTCTCATTACCACTAGATCAGAAGAAGTTTGTACTTCGATGGATTGTCAAAGGAAGATTTACCTGCCAATTTTAACGGATGAAGAAGCGTGGACTCTTTTCCAAAATAAAGCACTTATATTTGAAGACACCCCTGATACCTTAAAGAATCTGGCAAGATTAATTTCTAATGAATGTAAAGGATTGCCTGTTGCAATTGCAGCTGTAGCTAGTAGTTTGAAGGGAAAAGTCGAGACGATATGGAGTGTTGCATTGAATAAGTTGAGAAGTTCTAAGCCAATAAATATTGAAAGAGGTTTGACTGATCCCTACAAGTGCTTGCAGTTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTCCTGTTGTGTTCTGTGTTCCCTGAAGATTTTGAAATTCCAATTGAACTTTTAATAAGATGCGCAATAGGGTTAGGTGTAGTTGGAGAAGCACACTCATATGAGGTGGCTAGGAGTGAAGTGATTGCAGCCAAAATTAAGCTCGTTAGTTCTTGTTTATTGTTGGATGAAGAGGATGAATGTGTCAAAATGCATGACATAGTTCGCGATGTGGCCCACTTGATAGCAAAGAATGAGAATAAGATCATCAAGTGCGAAGAGGAAAAAGATGTGACTATTGAACAAAATTTCGTAAAATATCTATGGTGTGTGAAATTTCCAAATGATTTGGATTGTTCCAATCTTGAGTTTTTATTCTTAAAGACAAAATTGTTAGAATTTGATGGAATTTTCAAAAGAATGGGAATGCTCAAAGTTTTGATTCTTGTGAATGATGAGGATGGAAAAACACCATTGTCAAAAGTGTCTTTCCAAGCATTACAAAATCTCCGTTATTTACTCATTTACGGTTATGAGTTGAGCAACTTCACTTTTGTAGGCGATATGAAGAAACTCCAAAGTCTTTCGCTGCATGGCTGTTTATTGCCTTCATTTCCTGAATTACAAACTGATGTTGTAATTTCACAAGTAACATCCTTAAAATTGTTAGAGTTGAACAAATGTGACATTAAAGGGAAGAAGTTTGAAGTGATCAAAAGAACTCCACTACTGGAAGAGTTGTACATTGTTAATATTGAAGGAGAATGGGATGCTAACAGTGAAGACAATATTGAATTCTTTAACACCTTCAGTGTCCCCCAAACATTGCAAAG 2270 0.3934 PWIPFISVKADSTCARTDLARSGSESTRLPGLGQLGSTWTRANYTRPEPELTRLDIGSTWAQVDLERHGHGSFRLDTSPCPLDSTWVQTDSARHGDLVCGALNQLRYPCCFNNFIKKLEQEEGDLIVTRDSVQTFVAHAERQTRKTSEVVDKWLQDAIINVDNVSQLLKEAKTKKICCFGHCPNWIWRHRVGKKLANKTVDLEKFIVEGRKYVPFDRIATLPSGTLNILSEKCMNFESRQFAYEKLLEAVKNNDVAMIGLYGMGGCGKTTLAMEVRKLVEAEHLFDKVLFVPISSTVEVRRIQEKIASSLQYIFPETEEMERAQRLCLRLTQEKNILMILDDVWEKLDFGGIGIPSSEHHKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFQNKALIFEDTPDTLKNLARLISNECKGLPVAIAAVASSLKGKVETIWSVALNKLRSSKPINIERGLTDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDFEIPIELLIRCAIGLGVVGEAHSYEVARSEVIAAKIKLVSSCLLLDEEDECVKMHDIVRDVAHLIAKNENKIIKCEEEKDVTIEQNFVKYLWCVKFPNDLDCSNLEFLFLKTKLLEFDGIFKRMGMLKVLILVNDEDGKTPLSKVSFQALQNLRYLLIYGYELSNFTFVGDMKKLQSLSLHGCLLPSFPELQTDVVISQVTSLKLLELNKCDIKGKKFEVIKRTPLLEELYIVNIEGEWDANSEDNIEFFNTFSVPQTLQ 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0026 756 Coils Coil 154 174 - -
Pvu3g0026 756 Gene3D Ribonuclease Inhibitor 566 750 IPR032675 -
Pvu3g0026 756 PANTHER - 102 736 - -
Pvu3g0026 756 Gene3D - 389 473 IPR042197 -
Pvu3g0026 756 Pfam NB-ARC domain 244 477 IPR002182 GO:0043531
Pvu3g0026 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 490 IPR027417 -
Pvu3g0026 756 PRINTS Disease resistance protein signature 257 272 - -
Pvu3g0026 756 PRINTS Disease resistance protein signature 330 344 - -
Pvu3g0026 756 PRINTS Disease resistance protein signature 423 437 - -
Pvu3g0026 756 PRINTS Disease resistance protein signature 694 710 - -
Pvu3g0026 756 Gene3D - 228 385 IPR027417 -
Pvu3g0026 756 SUPERFAMILY L domain-like 549 729 - -
Pvu3g0026 756 Gene3D - 474 560 IPR036388 -
Pvu3g0026 756 PANTHER PHOSPHATASE, PUTATIVE-RELATED 102 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0026 Pvu-Chr3 203326 209364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0026 243 662 WRKY Transcription Factor Family AT5G45050 25.435 3.43e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0026 - - pvu:PHAVU_003G0023000 1501.11