Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0024 ATGTCTGCGACATCCAAGGTCACGCCTGCACTCCACTCCATCAAATCGTTGCCTCCTGAGTTCAAGATTACTTCTGGTAAAGTGGGAAACCGTGGAGATGCTAAATTGAAAAGCGGTGATGCCACTGGATCAAGTAGTCCGGATAATGGTGTTTTGGTTGGGGAGGTTTCTGAGGAAGCTCTTAACCATGCCGGTGACGTGGGTCTTTACGACGAGGATGTAGCGTACAGCAGGAAAGGTGTTTCATTAGAGGACAGATCGTCCATTGCTGATGAAGACCTAGAAACCGTTCCCATGTCCTTCCCATCAGTTTCAATGTCCTCCAGAGAACGCAGGTGGAGTGATACAACACCTTATTCTTCGAAAAAGAAGCTTCAGTCTTGGTTTCAACTTCCGAATGGGAACTGGGAGCTGGGGAAGCTGATAACAACTTCTGGAAATGAATCCATCATTTCACTGTCTGATGGGAGGGTTTTGAAAGTGAAAGAAGAAAGTTTAGTGCCGGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGTCTGTTTTATACAACCTGCAATATAGATACAATCAAAACATGATTTATACAAAAGCAGGGCCTGTTTTGGTTGCAATAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAACCCTCATGTATATGCAATAACAGACACAGCCATCAGAGAAATGATACGGGACGAAGTTAATCAATCTATAATTATAAGTGGTGAGAGTGGTGCAGGGAAGACTGAGACAGCAAAAATTGCAATGCAGTACTTGGCTGCGCTTGGTGGTGGAAGTGGAATAGAGTATGAAATTTTGAAGACTAATCCAATATTGGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCTGGTGCTAATATTCAAACATGTAATTCTTCTTCAGAGCTAACTTTTGTTATGCATCAACTCTCTCAAAGGCTTAGACTTCTAGGTGGAGATACATGTATGTCTAGAGTAGTCCAGTGCAATGAAGGGGAAAGATCCTATCATATATTTTATCAGCTATGTGCTGGCGCACCTCCATCTCTCAGGGGGAAGCTAAACCTACAAAATGCAGAAGATTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTATTAATGATGCAGAAGAATTTCGCACAGTCATGGAAGCTCTTGATGTTGTCCACATTGGTAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTGGGAAACATATCGTTTACTGTAATTGATAATGAAAATCATGTTCAAGCCGTAGAAGATGAGGGTCTATTTCATGTAGCCAAATTGATAGGCTGTGACATCGAAGATCTCAAGTTGACTCTATCAACTCGCAAGATGAAAGTTGGTAATGATAATATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCGAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCTGTTGGCAAAAGACGTACTGGCAGATCAATCAGTATTCTAGATATCTACGGCTTTGAATCTTTCAATAGAAACAGTTTTGAGCAGTTCTGCATAAATTATGCTAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATTCAAGACGGCATTGACTGGGCCAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCACTGGGGTTGTTGTCCCTGTTAGATGAAGAATCCACTTTCCCAAATGGAACAGATAAAACATTTGCGAATAAGCTTAAACAGCATCTGAATTCTAATTCATGTTTCAAAGGAGAAAGGGACCAAGCCTTTACTGTTCACCATTATGCTGGGCAGGTAACCTATGATACAACTGGATTCTTGGAGAAGAACAGAGACCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACATGTCCTCTTCCTCAAATATTTGCATCTCATATGCTCACTCAGTCTGATAAACCAGTAGTTGGTCCCTTGCACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCTATTGATGCAACGACTAGAAAGCACTACTCCACATTTTATTCGCTGTATTAAACCAAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTGTTGCAACAGCTGAGATGCTGCGGGGTCCTGGAAGTAGTTAGAATATCAAGATCGGGTTTTCCAACAAGAATGTCTCACCAAAAGTTTGCCCGAAGATATGGTTTTCTCCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTGGCAATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTTTTCCGAACAGGACAGATCGGTGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGTATTCTACGTGTACAAAGTTGTTTTCGGGGTCACCAAGCTCGTCGTTCTCTCAAGGAGCTTCAGGGGGGAATCTGTACTTTGCAGTCATTAATTAGGGGGAACAAAACAAGAAAGGAATATTCAGCTTTAGTGAAGAGGCATAGAGCTGCTGTTATTATACAGAAGCGCGTGAAAGCAGTATTTGCCAGAAACAGAATGAAGACTATTAGTGATGCGGCAACAGTCATACAAGCAGTTATTCGGGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAATCTGGAGACATGAAGATGAAAGACTCGGATGAGGTTGTGGTTAAGGCATCTTTCCTGGCCGAATTACAGCGGCGGGTACTCAAGGCTGAAGCTGCCTTGAGAGAGAAGGAAGATGAAAACGACATCATTCGTCAGAGACTCCAACAATATGAGAGCAGATGGTCTGAATATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAAAGCCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCATCTGTCAATGCGAGTGATGAGAGGGATTACAGCTGGGATGTAGGAGGTAATCACAGACGGCAAGAAAGCAACGGGGCAAGATCAACAAGTGCTGGTTTGAGTGTTATAAGTAGGTTGGCTGAAGAATTCGAGCATCGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCAAGTTTAAGCCCAGATCAAGAGCTTAGGAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAAGATTATGGGACAAGACTGCGTGAAACAAAAGTCATTTTAAATAAACTTGGAAATGAAGACGGTGCACTTGAGAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAACAGTACACGGATAAATTGA 3585 0.4095 MSATSKVTPALHSIKSLPPEFKITSGKVGNRGDAKLKSGDATGSSSPDNGVLVGEVSEEALNHAGDVGLYDEDVAYSRKGVSLEDRSSIADEDLETVPMSFPSVSMSSRERRWSDTTPYSSKKKLQSWFQLPNGNWELGKLITTSGNESIISLSDGRVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIENPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTCNSSSELTFVMHQLSQRLRLLGGDTCMSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLRQSNCYSITGINDAEEFRTVMEALDVVHIGKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFHVAKLIGCDIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDKTFANKLKQHLNSNSCFKGERDQAFTVHHYAGQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFLLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHQARRSLKELQGGICTLQSLIRGNKTRKEYSALVKRHRAAVIIQKRVKAVFARNRMKTISDAATVIQAVIRGWLVRRCSGNIGFLKSGDMKMKDSDEVVVKASFLAELQRRVLKAEAALREKEDENDIIRQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDVGGNHRRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLSPDQELRRLKQMFEAWKKDYGTRLRETKVILNKLGNEDGALEKMKKKWWGRRNSTRIN* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0024 1194 MobiDBLite consensus disorder prediction 1062 1098 - -
Pvu3g0024 1194 Gene3D - 565 759 - -
Pvu3g0024 1194 MobiDBLite consensus disorder prediction 1 57 - -
Pvu3g0024 1194 ProSiteProfiles IQ motif profile. 873 900 IPR000048 GO:0005515
Pvu3g0024 1194 Pfam IQ calmodulin-binding motif 898 914 IPR000048 GO:0005515
Pvu3g0024 1194 Pfam IQ calmodulin-binding motif 945 961 IPR000048 GO:0005515
Pvu3g0024 1194 Pfam IQ calmodulin-binding motif 875 892 IPR000048 GO:0005515
Pvu3g0024 1194 Gene3D - 921 964 - -
Pvu3g0024 1194 Gene3D - 873 920 - -
Pvu3g0024 1194 Gene3D Myosin VI head, motor domain, U50 subdomain 440 737 - -
Pvu3g0024 1194 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 122 171 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 Pfam Myosin head (motor domain) 177 857 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 CDD MYSc_Myo8 189 857 IPR036022 -
Pvu3g0024 1194 Gene3D - 379 438 - -
Pvu3g0024 1194 Gene3D Kinesin motor domain 178 798 IPR036961 -
Pvu3g0024 1194 MobiDBLite consensus disorder prediction 1084 1098 - -
Pvu3g0024 1194 Coils Coil 989 1037 - -
Pvu3g0024 1194 PANTHER MYOSIN 9 1194 - -
Pvu3g0024 1194 ProSiteProfiles IQ motif profile. 943 972 IPR000048 GO:0005515
Pvu3g0024 1194 SMART MYSc_2a 169 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 SMART iq_5 942 964 IPR000048 GO:0005515
Pvu3g0024 1194 SMART iq_5 893 915 IPR000048 GO:0005515
Pvu3g0024 1194 SMART iq_5 870 892 IPR000048 GO:0005515
Pvu3g0024 1194 SMART iq_5 919 941 IPR000048 GO:0005515
Pvu3g0024 1194 ProSiteProfiles Myosin motor domain profile. 175 869 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 916 IPR027417 -
Pvu3g0024 1194 PRINTS Myosin heavy chain signature 205 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 PRINTS Myosin heavy chain signature 259 284 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 PRINTS Myosin heavy chain signature 301 328 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 PRINTS Myosin heavy chain signature 555 583 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 PRINTS Myosin heavy chain signature 608 636 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pvu3g0024 1194 ProSiteProfiles IQ motif profile. 894 923 IPR000048 GO:0005515
Pvu3g0024 1194 Gene3D - 802 870 - -
Pvu3g0024 1194 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0024 Pvu-Chr3 172313 186476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0024 6 1192 Myosins gene family AT1G50360 72.750 0.0 1768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0024 - K10357 gmx:100781736 2156.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0024 3 172313 186476 Pvu3g0024 3 172313 186476 ECH