Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0004 ATGGCTGGAGTAGTGACATATACTGGTGCAAAAATAATTCAGAATGCTCGCTTGCTAGTAGAAAAAATAGGAAAACCACTTGAATTAGACAGGGATGGTATTTGGTGTGCACTACCGACACTCACAGATCCAATGAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTTTAATTAAAAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAACTTAAAGGTTTTGAGATCAAGCGCAGAGGTGAATTGAAGCTAATCAAAGTTTTCCAGGTGTGTATGCTTAATGTATGCAGAGGTATGAACAGGAATGAGCAGTCAAAAAAGCATAATGACTCAAATCGGGTCCCTCTTGTGGTGGATGATGAGATTCTTATTGAGTTAGAGGACTTCGGAAACAAGAGAAAGAAGAAGCGAATGTAA 492 0.3882 MAGVVTYTGAKIIQNARLLVEKIGKPLELDRDGIWCALPTLTDPMRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQVCMLNVCRGMNRNEQSKKHNDSNRVPLVVDDEILIELEDFGNKRKKKRM* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0004 163 Gene3D Palm domain of DNA polymerase 1 94 IPR023211 -
Pvu3g0004 163 SUPERFAMILY DNA/RNA polymerases 1 120 IPR043502 -
Pvu3g0004 163 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 115 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0004 Pvu-Chr3 14147 16027 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0004 1 119 Core DNA Replication Machinery Family AT1G08260 65.409 4.58e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0004 K02324 - pvu:PHAVU_003G000400g 330.102